RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 ADIPOR2Q86V24 386 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 TMPRSS6Q8IU80 811 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 MFN1Q8IWA4 741 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 HJURPQ8NCD3 748 aaPredicted RBP12.98□□□□□ -0.33
SMAD3-208ENST00000558827 SLC20A1Q8WUM9 679 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 RTKNQ9BST9 563 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 EDEM2Q9BV94 578 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 PCDHGC3Q9UN70 934 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 DNAH14Q0VDD8 3507 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 ADAMTS9Q9P2N4 1935 aa12.98□□□□□ -0.33
SMAD3-208ENST00000558827 KHNYNO15037 678 aaKnown RBP12.97□□□□□ -0.33
SMAD3-208ENST00000558827 NDUFS2O75306 463 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 LATS1O95835 1130 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 CFIP05156 583 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 MMEP08473 750 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 CYP11B1P15538 503 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 POLR2EP19388 210 aaKnown RBP12.97□□□□□ -0.33
SMAD3-208ENST00000558827 CDK11BP21127 795 aaKnown RBP12.97□□□□□ -0.33
SMAD3-208ENST00000558827 CTSOP43234 321 aaPredicted RBP12.97□□□□□ -0.33
SMAD3-208ENST00000558827 MAPK8P45983 427 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 COPB1P53618 953 aaKnown RBP12.97□□□□□ -0.33
SMAD3-208ENST00000558827 SLC6A3Q01959 620 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 ZNF33AQ06730 810 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 TRIM61Q5EBN2 209 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 EFHC1Q5JVL4 640 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 CDKAL1Q5VV42 579 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 LYSMD4Q5XG99 296 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 RBM43Q6ZSC3 357 aaKnown RBP12.97□□□□□ -0.33
SMAD3-208ENST00000558827 C11orf74Q86VG3 221 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 SLC41A1Q8IVJ1 513 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 RGL4Q8IZJ4 473 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 CPA5Q8WXQ8 436 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 SIPA1Q96FS4 1042 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 NOX5Q96PH1 765 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 DDX50Q9BQ39 737 aaKnown RBP12.97□□□□□ -0.33
SMAD3-208ENST00000558827 NAA15Q9BXJ9 866 aaKnown RBP12.97□□□□□ -0.33
SMAD3-208ENST00000558827 GANQ9H2C0 597 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 LHX5Q9H2C1 402 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 ANO10Q9NW15 660 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 TMEM63CQ9P1W3 806 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 INTS6Q9UL03 887 aaKnown RBP12.97□□□□□ -0.33
SMAD3-208ENST00000558827 PLA2G4CQ9UP65 541 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 CEP83Q9Y592 693 aa12.97□□□□□ -0.33
SMAD3-208ENST00000558827 LAMA1P25391 3075 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 LNP1A1A4G5 178 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 H0Y626 953 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 M0QYT0 321 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 TIMM44O43615 452 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 SDHBP21912 280 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 CSKP41240 450 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 IRAK1P51617 712 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 BPIFB4P59827 614 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 CDH18Q13634 790 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 SYCP1Q15431 976 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 STX1AQ16623 288 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 MEA1Q16626 185 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 PTPRNQ16849 979 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 PPM1JQ5JR12 505 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 FKBP15Q5T1M5 1219 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 CCDC183Q5T5S1 534 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 NAA35Q5VZE5 725 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 OLFML1Q6UWY5 402 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 C14orf80Q86SX3 495 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 ERICH1Q86X53 443 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 APCDD1Q8J025 514 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 AOPEPQ8N6M6 819 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 ATP6V0D2Q8N8Y2 350 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 TMEM35BQ8NCS4 154 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 OR2I1PQ8NGU4 316 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 WFIKKN2Q8TEU8 576 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 AZIN2Q96A70 460 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 TOE1Q96GM8 510 aaKnown RBP12.96□□□□□ -0.33
SMAD3-208ENST00000558827 LMLNQ96KR4 655 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 HSPA12BQ96MM6 686 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 SLC2A13Q96QE2 648 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 GPR174Q9BXC1 333 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 STK33Q9BYT3 514 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 ADAM33Q9BZ11 813 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 SIK2Q9H0K1 926 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 TMPRSS4Q9NRS4 437 aa12.96□□□□□ -0.33
SMAD3-208ENST00000558827 KNL1Q8NG31 2342 aa12.96□□□□□ -0.34
SMAD3-208ENST00000558827 ASCC3Q8N3C0 2202 aaKnown RBP12.95□□□□□ -0.34
SMAD3-208ENST00000558827 TYW5A2RUC4 315 aaKnown RBP12.95□□□□□ -0.34
SMAD3-208ENST00000558827 KCNU1A8MYU2 1149 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 F5H5T6 163 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 F8VZ95 297 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 AP5Z1O43299 807 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 HSF2BPO75031 334 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 LUC7L3O95232 432 aaKnown RBP12.95□□□□□ -0.34
SMAD3-208ENST00000558827 GJB6O95452 261 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 IGLV3-25P01717 112 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 TPM2P07951 284 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 PDGFRAP16234 1089 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 SULT1E1P49888 294 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 COPAP53621 1224 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 ZNF445P59923 1031 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 CENPCQ03188 943 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 TYRO3Q06418 890 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 ENPP2Q13822 863 aa12.95□□□□□ -0.34
SMAD3-208ENST00000558827 EIF4HQ15056 248 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms