RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 TFAP2CQ92754 450 aa16.61■□□□□ 0.25
HMBOX1-212ENST00000558662 BHMTQ93088 406 aa16.61■□□□□ 0.25
HMBOX1-212ENST00000558662 CFAP36Q96G28 342 aa16.61■□□□□ 0.25
HMBOX1-212ENST00000558662 LXNQ9BS40 222 aa16.61■□□□□ 0.25
HMBOX1-212ENST00000558662 NPLQ9BXD5 320 aaPredicted RBP16.61■□□□□ 0.25
HMBOX1-212ENST00000558662 COQ10BQ9H8M1 238 aa16.61■□□□□ 0.25
HMBOX1-212ENST00000558662 MID2Q9UJV3 735 aa16.61■□□□□ 0.25
HMBOX1-212ENST00000558662 SLC22A1O15245 554 aa16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 HTRA2O43464 458 aaPredicted RBP16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 MGEA5O60502 916 aa16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 GARTP22102 1010 aa16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 NME5P56597 212 aa16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 RHDQ02161 417 aa16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 ZNF846Q147U1 533 aa16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 PCLAFQ15004 111 aa16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 LSM12Q3MHD2 195 aaKnown RBP16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 FAM47CQ5HY64 1035 aa16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 INTS11Q5TA45 600 aaKnown RBP16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 TTC33Q6PID6 262 aaPredicted RBP16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 UNC45BQ8IWX7 931 aa16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 TAMM41Q96BW9 452 aa16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 FAF2Q96CS3 445 aa16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 LENG8Q96PV6 779 aaPredicted RBP16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 ZNF347Q96SE7 839 aa16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 P2RX7Q99572 595 aaKnown RBP16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 WDR12Q9GZL7 423 aaKnown RBP16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 VPS33BQ9H267 617 aa16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 KLHL11Q9NVR0 708 aa16.6■□□□□ 0.25
HMBOX1-212ENST00000558662 SPTLC1O15269 473 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 RNASEH2AO75792 299 aaKnown RBP16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 TOMM70O94826 608 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 ATE1O95260 518 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 TFPTP0C1Z6 253 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 BMP2P12643 396 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 GYS1P13807 737 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 ACO1P21399 889 aaKnown RBP16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 KDELR1P24390 212 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 EPHA3P29320 983 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 TCF7P36402 384 aaPredicted RBP16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 ZNF252P-AS1Q0IIN9 211 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 CAMK2BQ13554 666 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 ATP1A4Q13733 1029 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 SPCS2Q15005 226 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 NHSL2Q5HYW2 709 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 MFSD4BQ5TF39 518 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 ZCCHC23Q6ZST2 131 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 GOLM1Q8NBJ4 401 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 PBXIP1Q96AQ6 731 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 SLC4A5Q9BY07 1137 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 ADAMTS10Q9H324 1103 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 GPN2Q9H9Y4 310 aaPredicted RBP16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 RSAD1Q9HA92 442 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 WDR41Q9HAD4 459 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 TCF7L2Q9NQB0 619 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 KRBA1A5PL33 1030 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 NOP56O00567 594 aaKnown RBP16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 AIM2O14862 343 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 GNPATO15228 680 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 ZBTB14O43829 449 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 PIAS1O75925 651 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 CLPXO76031 633 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 CCNA2P20248 432 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 TKTP29401 623 aaKnown RBP16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 HSPA1LP34931 641 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 ART3Q13508 389 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 CEACAM7Q14002 265 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 TFDP2Q14188 446 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 N4BP2L1Q5TBK1 243 aaPredicted RBP16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 TXNRD3Q86VQ6 643 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 ATP6V0D2Q8N8Y2 350 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 S100ZQ8WXG8 99 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 CCDC127Q96BQ5 260 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 ZNF512Q96ME7 567 aaPredicted RBP16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 DCUN1D5Q9BTE7 237 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 PRDM16Q9HAZ2 1276 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 COPG2Q9UBF2 871 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 VTI1BQ9UEU0 232 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 BCS1LQ9Y276 419 aa16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 HEMK1Q9Y5R4 338 aaPredicted RBP16.59■□□□□ 0.25
HMBOX1-212ENST00000558662 CXorf49A8MYA2 514 aaPredicted RBP16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 KPNA7A9QM74 516 aa16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 PAPSS1O43252 624 aaPredicted RBP16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 AKAP10O43572 662 aa16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 LYPLA1O75608 230 aaPredicted RBP16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 RSL1D1O76021 490 aaKnown RBP16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 STAMBPO95630 424 aa16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 NTRK1P04629 796 aa16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 JUNBP17275 347 aaPredicted RBP16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 MAGEA3P43357 314 aa16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 NFATC3Q12968 1075 aa16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 TRIM25Q14258 630 aaKnown RBP16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 NOMO1Q15155 1222 aa16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 DGKDQ16760 1214 aa16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 SNX32Q86XE0 403 aa16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 CAMK1DQ8IU85 385 aa16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 GPD1LQ8N335 351 aa16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 FAM71DQ8N9W8 422 aa16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 TMEM35BQ8NCS4 154 aa16.58■□□□□ 0.24
HMBOX1-212ENST00000558662 RAB2BQ8WUD1 216 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms