RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 SFMBT1Q9UHJ3 866 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 FBXW11Q9UKB1 542 aa10.87□□□□□ -0.67
TPM1-210ENST00000558264 FBXO21O94952 628 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 MYCP01106 439 aaPredicted RBP10.86□□□□□ -0.67
TPM1-210ENST00000558264 TPSB2P20231 275 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 RPL9P32969 192 aaKnown RBP10.86□□□□□ -0.67
TPM1-210ENST00000558264 DSC3Q14574 896 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 PDK1Q15118 436 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 TPSAB1Q15661 275 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 TTC39BQ5VTQ0 682 aaPredicted RBP10.86□□□□□ -0.67
TPM1-210ENST00000558264 CCSAPQ6IQ19 270 aaPredicted RBP10.86□□□□□ -0.67
TPM1-210ENST00000558264 SCN4BQ8IWT1 228 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 MCUQ8NE86 351 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 OR52K1Q8NGK4 314 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 GSDMBQ8TAX9 411 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 GPR152Q8TDT2 470 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 ATXN7L3BQ96GX2 97 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 APOPT1Q96IL0 206 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 B3GALT6Q96L58 329 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 SRPK1Q96SB4 655 aaKnown RBP10.86□□□□□ -0.67
TPM1-210ENST00000558264 OR12D3Q9UGF7 316 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 NUP205Q92621 2012 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 HMX2A2RU54 273 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 COPEO14579 308 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 STK10O94804 968 aaKnown RBP10.86□□□□□ -0.67
TPM1-210ENST00000558264 DDHD2O94830 711 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 LRIG2O94898 1065 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 MOCS2O96007 188 aaPredicted RBP10.86□□□□□ -0.67
TPM1-210ENST00000558264 ABCG1P45844 678 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 GPR15P49685 360 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 ZBTB17Q13105 803 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 TUSC3Q13454 348 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 RTN4RL1Q86UN2 441 aaPredicted RBP10.86□□□□□ -0.67
TPM1-210ENST00000558264 ZNF276Q8N554 614 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 KLHDC9Q8NEP7 349 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 RFWD2Q8NHY2 731 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 ERP27Q96DN0 273 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 IQCGQ9H095 443 aaKnown RBP10.86□□□□□ -0.67
TPM1-210ENST00000558264 MYLK2Q9H1R3 596 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 ABI2Q9NYB9 513 aaPredicted RBP10.86□□□□□ -0.67
TPM1-210ENST00000558264 RCOR3Q9P2K3 495 aaPredicted RBP10.86□□□□□ -0.67
TPM1-210ENST00000558264 PSAT1Q9Y617 370 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 PTCH2Q9Y6C5 1203 aa10.86□□□□□ -0.67
TPM1-210ENST00000558264 MKI67P46013 3256 aaKnown RBP10.86□□□□□ -0.67
TPM1-210ENST00000558264 HACD1B0YJ81 288 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 PPP1R12AO14974 1030 aaPredicted RBP10.85□□□□□ -0.67
TPM1-210ENST00000558264 ZBTB24O43167 697 aaPredicted RBP10.85□□□□□ -0.67
TPM1-210ENST00000558264 SPAG6O75602 509 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 TSHRP16473 764 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 PRKCHP24723 683 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 PTPN3P26045 913 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 GRIK1P39086 918 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 NEK3P51956 506 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 NCALDP61601 193 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 MBTPS1Q14703 1052 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 PAFAH1B3Q15102 231 aaKnown RBP10.85□□□□□ -0.67
TPM1-210ENST00000558264 PLEKHG4Q58EX7 1191 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 ARHGAP36Q6ZRI8 547 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 SH2D5Q6ZV89 423 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 ARMC2Q8NEN0 867 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 DQX1Q8TE96 717 aaKnown RBP10.85□□□□□ -0.67
TPM1-210ENST00000558264 OXNAD1Q96HP4 312 aaPredicted RBP10.85□□□□□ -0.67
TPM1-210ENST00000558264 GORASP1Q9BQQ3 440 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 MANSC1Q9H8J5 431 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 ZNF395Q9H8N7 513 aaPredicted RBP10.85□□□□□ -0.67
TPM1-210ENST00000558264 PNPLA8Q9NP80 782 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 DMAP1Q9NPF5 467 aaPredicted RBP10.85□□□□□ -0.67
TPM1-210ENST00000558264 HCSTQ9UBK5 93 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 DNAJB4Q9UDY4 337 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 STARD13Q9Y3M8 1113 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 PCDHA11Q9Y5I1 949 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 TSC2P49815 1807 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 ZNF623O75123 536 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 RFPL1O75677 317 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 KRT37O76014 449 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 SNRPAP09012 282 aaKnown RBP10.85□□□□□ -0.67
TPM1-210ENST00000558264 ERVK-10P10266 1014 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 OR1G1P47890 313 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 ACLYP53396 1101 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 SLC5A3P53794 718 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 GRIK3Q13003 919 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 SEMA3BQ13214 749 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 SLC39A12Q504Y0 691 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 FAM171BQ6P995 826 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 CYB5D1Q6P9G0 228 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 CD99L2Q8TCZ2 262 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 ARNTL2Q8WYA1 636 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 ACBD6Q9BR61 282 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 XAB2Q9HCS7 855 aaKnown RBP10.85□□□□□ -0.67
TPM1-210ENST00000558264 CHKBQ9Y259 395 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 NUMBLQ9Y6R0 609 aa10.85□□□□□ -0.67
TPM1-210ENST00000558264 A0A0G2JND7 137 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 DFFAO00273 331 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 OPHN1O60890 802 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 RASSF9O75901 435 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 SOAT2O75908 522 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 CKBP12277 381 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 TPH1P17752 444 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 FDFT1P37268 417 aa10.84□□□□□ -0.67
TPM1-210ENST00000558264 ETV4P43268 484 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms