RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 XIRP2A4UGR9 3374 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 HELZP42694 1942 aaKnown RBP12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 SIGLEC16A6NMB1 481 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 HEPACAM2A8MVW5 462 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 LEFTY2O00292 366 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 NRDCO43847 1150 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 OLFM2O95897 454 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 PDGFRAP16234 1089 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 PFKLP17858 780 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 RFC1P35251 1148 aaPredicted RBP12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 MATKP42679 507 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 SULT1E1P49888 294 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 GSCP56915 257 aaPredicted RBP12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 RPL7AP62424 266 aaKnown RBP12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 SLC7A9P82251 487 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 ZXDBP98169 803 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 ATP11AP98196 1134 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 CCDC173Q0VFZ6 552 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 SFSWAPQ12872 951 aaKnown RBP12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 NME3Q13232 169 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 MAMLD1Q13495 774 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 CDO1Q16878 200 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 PLEKHA7Q6IQ23 1121 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 TRNP1Q6NT89 227 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 TAC4Q86UU9 113 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 ADHFE1Q8IWW8 467 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 ETFBKMTQ8IXQ9 262 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 CELF5Q8N6W0 485 aaKnown RBP12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 CCDC112Q8NEF3 446 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 SH3RF2Q8TEC5 729 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 FGF14Q92915 247 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 RSPRY1Q96DX4 576 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 CFAP57Q96MR6 1250 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 SLC2A13Q96QE2 648 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 DESI2Q9BSY9 194 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 RPP25Q9BUL9 199 aaKnown RBP12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 PLA2G2FQ9BZM2 168 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 FAM204AQ9H8W3 233 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 MARK1Q9P0L2 795 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 CFAP97Q9P2B7 532 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 EPS15L1Q9UBC2 864 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 NUMBLQ9Y6R0 609 aa12.51□□□□□ -0.41
HMGB1P8-201ENST00000558211 TCRBV5S1A1TA0A578 114 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 M0QYT0 321 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 TRUB2O95900 331 aaKnown RBP12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 ASGR2P07307 311 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 TFE3P19532 575 aaPredicted RBP12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 GPD1P21695 349 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 GRNP28799 593 aaKnown RBP12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 SDC4P31431 198 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 TBX4P57082 545 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 ZP2Q05996 745 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 GRM2Q14416 872 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 C15orf59Q2T9L4 293 aaPredicted RBP12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 C10orf76Q5T2E6 689 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 MSANTD2Q6P1R3 559 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 KLHDC10Q6PID8 442 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 MTSS1LQ765P7 747 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 BEND5Q7L4P6 421 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 KIAA1328Q86T90 577 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 YAF2Q8IY57 180 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 ZDHHC14Q8IZN3 488 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 ZNF276Q8N554 614 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 RNF34Q969K3 372 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 WBP2Q969T9 261 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 TBCBQ99426 244 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 DDX23Q9BUQ8 820 aaKnown RBP12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 NUP85Q9BW27 656 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 TRIM7Q9C029 511 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 MRPL47Q9HD33 250 aaKnown RBP12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 LUC7LQ9NQ29 371 aaKnown RBP12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 DDIT4Q9NX09 232 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 CTTNBP2NLQ9P2B4 639 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 PRKAG3Q9UGI9 489 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 STAP1Q9ULZ2 295 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 ARHGAP26Q9UNA1 814 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 SH3BP1Q9Y3L3 701 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 SCINQ9Y6U3 715 aa12.5□□□□□ -0.41
HMGB1P8-201ENST00000558211 C2CD4BA6NLJ0 364 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 LOC730098B7Z3J9 87 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 LCA5LO95447 670 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 CYP1A2P05177 515 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 TMEM253P0C7T8 217 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 FCARP24071 287 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 PSMA2P25787 234 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 GBP1P32455 592 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 MAP2K3P46734 347 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 COG7P83436 770 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 CCZ1BP86790 482 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 CCZ1P86791 482 aaPredicted RBP12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 DEUP1Q05D60 604 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 ZNF211Q13398 564 aaPredicted RBP12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 HTR4Q13639 388 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 CCDC14Q49A88 953 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 VITQ6UXI7 678 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 RIN3Q8TB24 985 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 BPIFB1Q8TDL5 484 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 ELSPBP1Q96BH3 223 aa12.49□□□□□ -0.41
HMGB1P8-201ENST00000558211 BTBD6Q96KE9 485 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms