RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 PROCP04070 461 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 MMP3P08254 477 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 L1CAMP32004 1257 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 TXNL4AP83876 142 aaKnown RBP11.19□□□□□ -0.62
USP3-206ENST00000558157 NFX1Q12986 1120 aaKnown RBP11.19□□□□□ -0.62
USP3-206ENST00000558157 UBAP2LQ14157 1087 aaKnown RBP11.19□□□□□ -0.62
USP3-206ENST00000558157 EMC2Q15006 297 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 OASLQ15646 514 aaKnown RBP11.19□□□□□ -0.62
USP3-206ENST00000558157 HP1BP3Q5SSJ5 553 aaPredicted RBP11.19□□□□□ -0.62
USP3-206ENST00000558157 RSPH3Q86UC2 560 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 ZNF677Q86XU0 584 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 ANKMY2Q8IV38 441 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 FAM178BQ8IXR5 827 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 C12orf56Q8IXR9 622 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 MCOLN2Q8IZK6 566 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 PPM1KQ8N3J5 372 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 DDX1Q92499 740 aaKnown RBP11.19□□□□□ -0.62
USP3-206ENST00000558157 SERAC1Q96JX3 654 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 SERPINI1Q99574 410 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 OLFM1Q99784 485 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 NIFKQ9BYG3 293 aaKnown RBP11.19□□□□□ -0.62
USP3-206ENST00000558157 SMARCAD1Q9H4L7 1026 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 PDLIM7Q9NR12 457 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 NRBP2Q9NSY0 501 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 SLC38A7Q9NVC3 462 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 GIN1Q9NXP7 522 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 STK39Q9UEW8 545 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 B3GNT3Q9Y2A9 372 aa11.19□□□□□ -0.62
USP3-206ENST00000558157 K7ENM7 598 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 CNOT3O75175 753 aaKnown RBP11.18□□□□□ -0.62
USP3-206ENST00000558157 FBXO21O94952 628 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 C21orf59P57076 290 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 RPS3AP61247 264 aaKnown RBP11.18□□□□□ -0.62
USP3-206ENST00000558157 ESRRGP62508 458 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 CBLBQ13191 982 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 RALGPS1Q5JS13 557 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 ZNF362Q5T0B9 420 aaPredicted RBP11.18□□□□□ -0.62
USP3-206ENST00000558157 LGSNQ5TDP6 509 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 MFSD4BQ5TF39 518 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 TTC39BQ5VTQ0 682 aaPredicted RBP11.18□□□□□ -0.62
USP3-206ENST00000558157 PPP1R2P3Q6NXS1 205 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 AMIGO2Q86SJ2 522 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 NUDCD3Q8IVD9 361 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 POU5F2Q8N7G0 328 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 TRPV1Q8NER1 839 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 ZNF420Q8TAQ5 688 aaPredicted RBP11.18□□□□□ -0.62
USP3-206ENST00000558157 NLRP7Q8WX94 980 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 STARD8Q92502 1023 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 KLF6Q99612 283 aaPredicted RBP11.18□□□□□ -0.62
USP3-206ENST00000558157 HGH1Q9BTY7 390 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 HIPK3Q9H422 1215 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 RIMS3Q9UJD0 308 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 ARHGAP26Q9UNA1 814 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 PCNTO95613 3336 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 A0A0B4J269 797 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 FAM170AA1A519 330 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 KRT37O76014 449 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 CYP2C9P11712 490 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 UNGP13051 313 aaPredicted RBP11.18□□□□□ -0.62
USP3-206ENST00000558157 TTKP33981 857 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 TUBB3Q13509 450 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 ALCAMQ13740 583 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 TARBP2Q15633 366 aaKnown RBP11.18□□□□□ -0.62
USP3-206ENST00000558157 CHI3L2Q15782 390 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 TLK2Q86UE8 772 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 GPR180Q86V85 440 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 CHERPQ8IWX8 916 aaKnown RBP11.18□□□□□ -0.62
USP3-206ENST00000558157 PDIK1LQ8N165 341 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 GLIS1Q8NBF1 620 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 FBXO36Q8NEA4 188 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 MCPH1Q8NEM0 835 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 PPP4R1Q8TF05 950 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 BSNDQ8WZ55 320 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 CCDC124Q96CT7 223 aaKnown RBP11.18□□□□□ -0.62
USP3-206ENST00000558157 PLEKHA8Q96JA3 519 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 KREMEN1Q96MU8 473 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 PHF12Q96QT6 1004 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 HEPHQ9BQS7 1158 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 ADAM33Q9BZ11 813 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 POLR3FQ9H1D9 316 aaPredicted RBP11.18□□□□□ -0.62
USP3-206ENST00000558157 MRPL47Q9HD33 250 aaKnown RBP11.18□□□□□ -0.62
USP3-206ENST00000558157 ATAD3AQ9NVI7 634 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 EPS15L1Q9UBC2 864 aa11.18□□□□□ -0.62
USP3-206ENST00000558157 GPR25O00155 361 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 LSM1O15116 133 aaKnown RBP11.17□□□□□ -0.62
USP3-206ENST00000558157 DYNC1LI2O43237 492 aaPredicted RBP11.17□□□□□ -0.62
USP3-206ENST00000558157 CYBAP13498 195 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 PTPN2P17706 415 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 ITGAXP20702 1163 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 MXI1P50539 228 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 PEX3P56589 373 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 TRIM32Q13049 653 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 MFSD14CQ5VZR4 134 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 DEFB107AQ8IZN7 70 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 CENPSQ8N2Z9 138 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 NAT8LQ8N9F0 302 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 PPP1R14CQ8TAE6 165 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 NACA2Q9H009 215 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 TMEM117Q9H0C3 514 aa11.17□□□□□ -0.62
USP3-206ENST00000558157 PNPLA8Q9NP80 782 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms