RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 CHFRQ96EP1 664 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 IRF2BPLQ9H1B7 796 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 CHRDQ9H2X0 955 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 ARHGEF4Q9NR80 690 aa14.16□□□□□ -0.14
SHMT2-234ENST00000557703 EPN1Q9Y6I3 576 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-234ENST00000557703 IGLV3-10A0A075B6K4 115 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 SYNJ2BP-COX16A0A087WUM0 186 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 A0A0A6YYK5 440 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-234ENST00000557703 CXorf51AA0A1B0GTR3 108 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 A0A1B0GVM2 712 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 TCAF2A6NFQ2 919 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 CHURC1-FNTBB4DL54 471 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 KAT7O95251 611 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 NDUFA10O95299 355 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 MOCS2O96007 188 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-234ENST00000557703 TARSP26639 723 aaKnown RBP14.15□□□□□ -0.14
SHMT2-234ENST00000557703 HOXD9P28356 352 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-234ENST00000557703 AVPR2P30518 371 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 SOX9P48436 509 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 HADHBP55084 474 aaKnown RBP14.15□□□□□ -0.14
SHMT2-234ENST00000557703 AUHQ13825 339 aaKnown RBP14.15□□□□□ -0.14
SHMT2-234ENST00000557703 PON2Q15165 354 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 BOLA3Q53S33 107 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 IER5LQ5T953 404 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 CWF19L1Q69YN2 538 aaKnown RBP14.15□□□□□ -0.14
SHMT2-234ENST00000557703 NADSYN1Q6IA69 706 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 TXNDC11Q6PKC3 985 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 SLFN11Q7Z7L1 901 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 CCDC105Q8IYK2 499 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 SPEM1Q8N4L4 309 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.15□□□□□ -0.14
SHMT2-234ENST00000557703 TERB1Q8NA31 727 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 UCMAQ8WVF2 138 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 RFFLQ8WZ73 363 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 LRFN3Q9BTN0 628 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 NUP85Q9BW27 656 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 LMAN1LQ9HAT1 526 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 DNAJC17Q9NVM6 304 aaKnown RBP14.15□□□□□ -0.14
SHMT2-234ENST00000557703 COX16Q9P0S2 106 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 DLGAP2Q9P1A6 1054 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 CTTNBP2NLQ9P2B4 639 aa14.15□□□□□ -0.14
SHMT2-234ENST00000557703 TBC1D3BA6NDS4 549 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 DRGXA6NNA5 263 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 CCP110O43303 1012 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 PRPSAP2O60256 369 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 PAPSS2O95340 614 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-234ENST00000557703 CISD3P0C7P0 127 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 TFE3P19532 575 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-234ENST00000557703 SLC6A4P31645 630 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 L1CAMP32004 1257 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 MAN1A1P33908 653 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 MAGEA1P43355 309 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 CDH4P55283 916 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 FZD5Q13467 585 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 CDO1Q16878 200 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 C15orf59Q2T9L4 293 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-234ENST00000557703 EFHC2Q5JST6 749 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 ERMARDQ5T6L9 678 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 FSTL4Q6MZW2 842 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 KIAA0907Q7Z7F0 614 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-234ENST00000557703 PHLDB2Q86SQ0 1253 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 SETD3Q86TU7 594 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-234ENST00000557703 FAM131BQ86XD5 332 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 LGI2Q8N0V4 545 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 PHTF2Q8N3S3 785 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 TTC8Q8TAM2 541 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 ZNF564Q8TBZ8 553 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-234ENST00000557703 ACDQ96AP0 544 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 ADAM33Q9BZ11 813 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 CALCOCO1Q9P1Z2 691 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 MYO1AQ9UBC5 1043 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 OR12D3Q9UGF7 316 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 ANAPC7Q9UJX3 599 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 NDRG2Q9UN36 371 aaKnown RBP14.14□□□□□ -0.15
SHMT2-234ENST00000557703 HS3ST4Q9Y661 456 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 ZNF318Q5VUA4 2279 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 CACNA1HO95180 2353 aa14.14□□□□□ -0.15
SHMT2-234ENST00000557703 MIA3Q5JRA6 1907 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 BTNL10A8MVZ5 291 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 SCAMP3O14828 347 aaKnown RBP14.13□□□□□ -0.15
SHMT2-234ENST00000557703 TBL1XO60907 577 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 MOCS3O95396 460 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 CD72P21854 359 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 ETFBP38117 255 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 SLC1A1P43005 524 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 PLK1P53350 603 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 SULT2A1Q06520 285 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 CDH18Q13634 790 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 HADHQ16836 314 aaKnown RBP14.13□□□□□ -0.15
SHMT2-234ENST00000557703 RAP1GAP2Q684P5 730 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 FBXL22Q6P050 247 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 RFWD3Q6PCD5 774 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 ZNF783Q6ZMS7 281 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 ANKS1BQ7Z6G8 1248 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 MFN1Q8IWA4 741 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 AHI1Q8N157 1196 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 KDM1BQ8NB78 822 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 TEKT4Q8WW24 435 aa14.13□□□□□ -0.15
SHMT2-234ENST00000557703 RPRD1AQ96P16 312 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-234ENST00000557703 FAM126AQ9BYI3 521 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms