RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 CIR1Q86X95 450 aaPredicted RBP15.8■□□□□ 0.12
NEDD1-213ENST00000557644 C17orf53Q8N3J3 647 aaPredicted RBP15.8■□□□□ 0.12
NEDD1-213ENST00000557644 CHFRQ96EP1 664 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 DHX35Q9H5Z1 703 aaKnown RBP15.8■□□□□ 0.12
NEDD1-213ENST00000557644 HEBP1Q9NRV9 189 aa15.8■□□□□ 0.12
NEDD1-213ENST00000557644 NEDD8-MDP1E9PL57 170 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 ZNF683Q8IZ20 524 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 RNF10Q8N5U6 811 aaKnown RBP15.79■□□□□ 0.12
NEDD1-213ENST00000557644 KIAA1524Q8TCG1 905 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 DDI1Q8WTU0 396 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 C1orf74Q96LT6 269 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 NCAPGQ9BPX3 1015 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 BBS2Q9BXC9 721 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.79■□□□□ 0.12
NEDD1-213ENST00000557644 E9PAM4 449 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 F5H5T6 163 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 ZSCAN12O43309 604 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 SLC1A1P43005 524 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 AIF1P55008 147 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 HADHQ16836 314 aaKnown RBP15.79■□□□□ 0.12
NEDD1-213ENST00000557644 GAB4Q2WGN9 574 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 ITPRIPL2Q3MIP1 535 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 FYB2Q5VWT5 728 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 NAT16Q8N8M0 369 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 CSGALNACT1Q8TDX6 532 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 TMA16Q96EY4 203 aaKnown RBP15.79■□□□□ 0.12
NEDD1-213ENST00000557644 RPRD1AQ96P16 312 aaPredicted RBP15.79■□□□□ 0.12
NEDD1-213ENST00000557644 OSBPL2Q9H1P3 480 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 SLC2A4RGQ9NR83 387 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 STIM2Q9P246 746 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 CLEC4EQ9ULY5 219 aa15.79■□□□□ 0.12
NEDD1-213ENST00000557644 LRIG2O94898 1065 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 FTCDO95954 541 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 ADH5P11766 374 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 TYRP14679 529 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 MARCKSL1P49006 195 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 IFI16Q16666 785 aaKnown RBP15.78■□□□□ 0.12
NEDD1-213ENST00000557644 BOLA3Q53S33 107 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 PPP6R3Q5H9R7 873 aaPredicted RBP15.78■□□□□ 0.12
NEDD1-213ENST00000557644 C12orf40Q86WS4 652 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 CCAR2Q8N163 923 aaKnown RBP15.78■□□□□ 0.12
NEDD1-213ENST00000557644 CPA6Q8N4T0 437 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 KCTD15Q96SI1 283 aaPredicted RBP15.78■□□□□ 0.12
NEDD1-213ENST00000557644 DDX50Q9BQ39 737 aaKnown RBP15.78■□□□□ 0.12
NEDD1-213ENST00000557644 MPP6Q9NZW5 540 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 PACSIN2Q9UNF0 486 aaPredicted RBP15.78■□□□□ 0.12
NEDD1-213ENST00000557644 F5P12259 2224 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 CREB3O43889 395 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 TBL1XO60907 577 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 CNTN5O94779 1100 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 ADH1CP00326 375 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 HOXD9P28356 352 aaPredicted RBP15.78■□□□□ 0.12
NEDD1-213ENST00000557644 L1CAMP32004 1257 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 GJA4P35212 333 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 MTA1Q13330 715 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 KRT35Q92764 455 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 CALR3Q96L12 384 aaKnown RBP15.78■□□□□ 0.12
NEDD1-213ENST00000557644 TRPV5Q9NQA5 729 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 NEU3Q9UQ49 428 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 COL4A3Q01955 1670 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 TICRRQ7Z2Z1 1910 aa15.78■□□□□ 0.12
NEDD1-213ENST00000557644 TRIM24O15164 1050 aa15.77■□□□□ 0.12
NEDD1-213ENST00000557644 PENKP01210 267 aaPredicted RBP15.77■□□□□ 0.12
NEDD1-213ENST00000557644 CD48P09326 243 aa15.77■□□□□ 0.12
NEDD1-213ENST00000557644 SEMA3BQ13214 749 aa15.77■□□□□ 0.12
NEDD1-213ENST00000557644 MPPE1Q53F39 396 aa15.77■□□□□ 0.12
NEDD1-213ENST00000557644 ALFQ53S48 1182 aa15.77■□□□□ 0.12
NEDD1-213ENST00000557644 MANEALQ5VSG8 457 aa15.77■□□□□ 0.12
NEDD1-213ENST00000557644 NT5DC3Q86UY8 548 aa15.77■□□□□ 0.12
NEDD1-213ENST00000557644 TEKT4Q8WW24 435 aa15.77■□□□□ 0.12
NEDD1-213ENST00000557644 DNASE1L2Q92874 299 aa15.77■□□□□ 0.12
NEDD1-213ENST00000557644 CD101Q93033 1021 aa15.77■□□□□ 0.12
NEDD1-213ENST00000557644 MARK1Q9P0L2 795 aa15.77■□□□□ 0.12
NEDD1-213ENST00000557644 HOXC11O43248 304 aaPredicted RBP15.77■□□□□ 0.11
NEDD1-213ENST00000557644 CYBBP04839 570 aa15.77■□□□□ 0.11
NEDD1-213ENST00000557644 SLC6A11P48066 632 aa15.77■□□□□ 0.11
NEDD1-213ENST00000557644 PFKPQ01813 784 aa15.77■□□□□ 0.11
NEDD1-213ENST00000557644 GAD2Q05329 585 aa15.77■□□□□ 0.11
NEDD1-213ENST00000557644 MESP2Q0VG99 397 aa15.77■□□□□ 0.11
NEDD1-213ENST00000557644 RWDD4Q6NW29 188 aaKnown RBP15.77■□□□□ 0.11
NEDD1-213ENST00000557644 WFDC5Q8TCV5 224 aa15.77■□□□□ 0.11
NEDD1-213ENST00000557644 RAPGEF5Q92565 580 aa15.77■□□□□ 0.11
NEDD1-213ENST00000557644 CA14Q9ULX7 337 aa15.77■□□□□ 0.11
NEDD1-213ENST00000557644 PIAS3Q9Y6X2 628 aa15.77■□□□□ 0.11
NEDD1-213ENST00000557644 IGLV3-10A0A075B6K4 115 aa15.76■□□□□ 0.11
NEDD1-213ENST00000557644 KRT7P08729 469 aa15.76■□□□□ 0.11
NEDD1-213ENST00000557644 GOT1P17174 413 aa15.76■□□□□ 0.11
NEDD1-213ENST00000557644 NR1H3Q13133 447 aa15.76■□□□□ 0.11
NEDD1-213ENST00000557644 DPYSL2Q16555 572 aa15.76■□□□□ 0.11
NEDD1-213ENST00000557644 SLC44A4Q53GD3 710 aa15.76■□□□□ 0.11
NEDD1-213ENST00000557644 ZFYVE27Q5T4F4 411 aa15.76■□□□□ 0.11
NEDD1-213ENST00000557644 TXNDC11Q6PKC3 985 aa15.76■□□□□ 0.11
NEDD1-213ENST00000557644 LRRC31Q6UY01 552 aa15.76■□□□□ 0.11
NEDD1-213ENST00000557644 PEX26Q7Z412 305 aa15.76■□□□□ 0.11
NEDD1-213ENST00000557644 POLNQ7Z5Q5 900 aa15.76■□□□□ 0.11
NEDD1-213ENST00000557644 PSTKQ8IV42 348 aaKnown RBP15.76■□□□□ 0.11
NEDD1-213ENST00000557644 RHOT1Q8IXI2 618 aa15.76■□□□□ 0.11
NEDD1-213ENST00000557644 HJURPQ8NCD3 748 aaPredicted RBP15.76■□□□□ 0.11
NEDD1-213ENST00000557644 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.76■□□□□ 0.11
NEDD1-213ENST00000557644 PI4K2BG5E9Z4 385 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms