RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 ZNF474Q6S9Z5 364 aaPredicted RBP1.93□□□□□ -2.1
HIF1A-212ENST00000557538 FSTL5Q8N475 847 aaPredicted RBP1.93□□□□□ -2.1
HIF1A-212ENST00000557538 TOR1AIP2Q8NFQ8 470 aa1.93□□□□□ -2.1
HIF1A-212ENST00000557538 SEMA6DQ8NFY4 1073 aa1.93□□□□□ -2.1
HIF1A-212ENST00000557538 DAZAP1Q96EP5 407 aaKnown RBP1.93□□□□□ -2.1
HIF1A-212ENST00000557538 CLMNQ96JQ2 1002 aa1.93□□□□□ -2.1
HIF1A-212ENST00000557538 MAELQ96JY0 434 aaKnown RBP1.93□□□□□ -2.1
HIF1A-212ENST00000557538 FRG2BQ96QU4 278 aa1.93□□□□□ -2.1
HIF1A-212ENST00000557538 BRF2Q9HAW0 419 aa1.93□□□□□ -2.1
HIF1A-212ENST00000557538 INSL6Q9Y581 213 aa1.93□□□□□ -2.1
HIF1A-212ENST00000557538 UNC13AQ9UPW8 1703 aa1.93□□□□□ -2.1
HIF1A-212ENST00000557538 TARM1B6A8C7 271 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 EIF3FO00303 357 aaPredicted RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 SUV39H1O43463 412 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 HEXIM1O94992 359 aaKnown RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 ENO1P06733 434 aaKnown RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 RHOP08100 348 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 GJC1P36383 396 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 PCP4P48539 62 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 PPM1FP49593 454 aaPredicted RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 RCAN1P53805 252 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 MPP1Q00013 466 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 TBL3Q12788 808 aaKnown RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 CBFBQ13951 182 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 PUM1Q14671 1186 aaKnown RBP eCLIP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 ZNF569Q5MCW4 686 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 KYAT3Q6YP21 454 aaKnown RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 NEK10Q6ZWH5 1172 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 ZNF366Q8N895 744 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 TERB1Q8NA31 727 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 FAM47BQ8NA70 645 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 PCYOX1LQ8NBM8 494 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 LSM14AQ8ND56 463 aaKnown RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 ZMIZ2Q8NF64 920 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 TMEM170AQ8WVE7 144 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 SNRNP27Q8WVK2 155 aaKnown RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 NAP1L4Q99733 375 aaKnown RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 TMEM79Q9BSE2 394 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 SLC25A10Q9UBX3 287 aaPredicted RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 SERGEFQ9UGK8 458 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 PKP3Q9Y446 797 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 MCIDASD6RGH6 385 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 NPIPB8E9PQR5 432 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 PRYO14603 147 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 PRAMEF2O60811 474 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 GUCY1B2O75343 617 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 ALDOAP04075 364 aaKnown RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 GYS1P13807 737 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 NDUFB7P17568 137 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 CDH2P19022 906 aaPredicted RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 CLCN2P51788 898 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 PRKAA2P54646 552 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 FAM3BP58499 235 aaPredicted RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 TAS2R50P59544 299 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 PTP4A2Q12974 167 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 CNGA3Q16281 694 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 SOWAHCQ53LP3 525 aaPredicted RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 HYIQ5T013 277 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 LRRC8DQ7L1W4 858 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 GALNT7Q86SF2 657 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 ZDHHC23Q8IYP9 409 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 C8orf58Q8NAV2 365 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 NEK9Q8TD19 979 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 ZFPM2Q8WW38 1151 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 AKAP1Q92667 903 aaKnown RBP eCLIP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 REXO5Q96IC2 774 aaKnown RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 C7orf26Q96N11 449 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 MECRQ9BV79 373 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 DPCDQ9BVM2 203 aaPredicted RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 PHF7Q9BWX1 381 aaPredicted RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 AGXT2Q9BYV1 514 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 ELAC1Q9H777 363 aaKnown RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 SEPSECSQ9HD40 501 aaKnown RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 MTMR4Q9NYA4 1195 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 TFCP2L1Q9NZI6 479 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 ADAM21Q9UKJ8 722 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 TBX20Q9UMR3 447 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 CRYL1Q9Y2S2 319 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 WIPF3A6NGB9 483 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 FAM90A7PA6NKC0 464 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 FAM90A22PA8MWA6 464 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 FAM90A12PA8MX19 464 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 FAM90A23PA8MXZ1 464 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 FESP07332 822 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 HOXB9P17482 250 aaPredicted RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 TGM2P21980 687 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 PAX3P23760 479 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 NTSR1P30989 418 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 GRK5P34947 590 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 CLK3P49761 638 aaKnown RBP1.92□□□□□ -2.1
HIF1A-212ENST00000557538 PCID2Q5JVF3 399 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 SUMO4Q6EEV6 95 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 KIRREL2Q6UWL6 708 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 CCDC105Q8IYK2 499 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 OTUD6BQ8N6M0 293 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 C11orf44Q8N8P7 122 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 FAM71DQ8N9W8 422 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 ADAMTS15Q8TE58 950 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 HDAC7Q8WUI4 952 aa1.92□□□□□ -2.1
HIF1A-212ENST00000557538 IGFBPL1Q8WX77 278 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms