RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 STARD3Q14849 445 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 SURF1Q15526 300 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 SNRNP35Q16560 246 aaKnown RBP6.16□□□□□ -1.42
VPS33B-207ENST00000557470 DCAF12L1Q5VU92 463 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 RRAGBQ5VZM2 374 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 IL27RAQ6UWB1 636 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 DBX2Q6ZNG2 339 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 PAQR9Q6ZVX9 377 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 CACUL1Q86Y37 369 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 GALNT15Q8N3T1 639 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 ZMIZ2Q8NF64 920 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 CADM4Q8NFZ8 388 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 PIP4K2CQ8TBX8 421 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 RHBDD1Q8TEB9 315 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 CCDC127Q96BQ5 260 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 CLIC6Q96NY7 704 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 UBL7Q96S82 380 aaPredicted RBP6.16□□□□□ -1.42
VPS33B-207ENST00000557470 CGRRF1Q99675 332 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 CDC6Q99741 560 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 MED10Q9BTT4 135 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 XYLT2Q9H1B5 865 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 SMYD3Q9H7B4 428 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 GPAMQ9HCL2 828 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 DMAP1Q9NPF5 467 aaPredicted RBP6.16□□□□□ -1.42
VPS33B-207ENST00000557470 ITM2CQ9NQX7 267 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 PANK4Q9NVE7 773 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 OSER1Q9NX31 292 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 PLK2Q9NYY3 685 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 STIM2Q9P246 746 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 WDR35Q9P2L0 1181 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 CCDC39Q9UFE4 941 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 EIF2B4Q9UI10 523 aaKnown RBP6.16□□□□□ -1.42
VPS33B-207ENST00000557470 FBXO2Q9UK22 296 aaPredicted RBP6.16□□□□□ -1.42
VPS33B-207ENST00000557470 PCDHGB2Q9Y5G2 931 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 STON1Q9Y6Q2 735 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 ATP8B3O60423 1300 aa6.16□□□□□ -1.42
VPS33B-207ENST00000557470 CABIN1Q9Y6J0 2220 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 MGAQ8IWI9 3026 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 NAV2Q8IVL1 2488 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 A0A087X0B3 334 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 MDM4O15151 490 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 CYP26A1O43174 497 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 TNFSF14O43557 240 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 BEST1O76090 585 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 IGLV3-19P01714 112 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 CCDC130P13994 396 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 TNNI1P19237 187 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 ACO1P21399 889 aaKnown RBP6.15□□□□□ -1.42
VPS33B-207ENST00000557470 ITPKBP27987 946 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 HOXD13P35453 343 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 IL12RB1P42701 662 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 AFF3P51826 1226 aaKnown RBP6.15□□□□□ -1.42
VPS33B-207ENST00000557470 COPAP53621 1224 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 CDH8P55286 799 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 CYP24A1Q07973 514 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 C19orf57Q0VDD7 668 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 ENPP2Q13822 863 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 PSMD6Q15008 389 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 SMAD1Q15797 465 aaKnown RBP6.15□□□□□ -1.42
VPS33B-207ENST00000557470 KIF19Q2TAC6 998 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 CCDC157Q569K6 752 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 LAYNQ6UX15 382 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 SCARA5Q6ZMJ2 495 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 KRBA2Q6ZNG9 492 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 GPRIN1Q7Z2K8 1008 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 BRAPQ7Z569 592 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 KIAA0907Q7Z7F0 614 aaPredicted RBP6.15□□□□□ -1.42
VPS33B-207ENST00000557470 FAM124AQ86V42 546 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 TMPRSS6Q8IU80 811 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 WDR75Q8IWA0 830 aaKnown RBP6.15□□□□□ -1.42
VPS33B-207ENST00000557470 FUKQ8N0W3 1084 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 SNX19Q92543 992 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 HPS3Q969F9 1004 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 ELMO3Q96BJ8 720 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 SIPA1Q96FS4 1042 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 SMARCD1Q96GM5 515 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 TMX3Q96JJ7 454 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 SMOQ99835 787 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 PANK2Q9BZ23 570 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 SAP130Q9H0E3 1048 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 TLR8Q9NR97 1041 aaKnown RBP6.15□□□□□ -1.42
VPS33B-207ENST00000557470 COMMD8Q9NX08 183 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 THAP10Q9P2Z0 257 aaPredicted RBP6.15□□□□□ -1.42
VPS33B-207ENST00000557470 LSM7Q9UK45 103 aaKnown RBP6.15□□□□□ -1.42
VPS33B-207ENST00000557470 FBXO10Q9UK96 956 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 NUDT5Q9UKK9 219 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 SLC27A6Q9Y2P4 619 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 SNX11Q9Y5W9 270 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 CLIC4Q9Y696 253 aa6.15□□□□□ -1.42
VPS33B-207ENST00000557470 PTPRQQ9UMZ3 2332 aa6.15□□□□□ -1.43
VPS33B-207ENST00000557470 ATMQ13315 3056 aa6.14□□□□□ -1.43
VPS33B-207ENST00000557470 PLK4O00444 970 aa6.14□□□□□ -1.43
VPS33B-207ENST00000557470 KCNK3O14649 394 aa6.14□□□□□ -1.43
VPS33B-207ENST00000557470 ATXN7O15265 892 aaPredicted RBP6.14□□□□□ -1.43
VPS33B-207ENST00000557470 TGFB1I1O43294 461 aa6.14□□□□□ -1.43
VPS33B-207ENST00000557470 SYNCRIPO60506 623 aaKnown RBP6.14□□□□□ -1.43
VPS33B-207ENST00000557470 STC2O76061 302 aa6.14□□□□□ -1.43
VPS33B-207ENST00000557470 PENKP01210 267 aaPredicted RBP6.14□□□□□ -1.43
VPS33B-207ENST00000557470 KLKB1P03952 638 aa6.14□□□□□ -1.43
VPS33B-207ENST00000557470 CELA2BP08218 269 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms