RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 TRIM24O15164 1050 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 MAPK13O15264 365 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 FLRT2O43155 660 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 ZNF217O75362 1048 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 URI1O94763 535 aaPredicted RBP13.1□□□□□ -0.31
SHMT2-230ENST00000557427 P4HA1P13674 534 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 ANXA13P27216 316 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 PIK3CAP42336 1068 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 MAGEA11P43364 429 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 ORC1Q13415 861 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 SYCP2LQ5T4T6 812 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 VSTM1Q6UX27 236 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 LRRC69Q6ZNQ3 347 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 RRAGAQ7L523 313 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 ACOT1Q86TX2 421 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 ETFBKMTQ8IXQ9 262 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 ZCCHC9Q8N567 271 aaKnown RBP13.1□□□□□ -0.31
SHMT2-230ENST00000557427 FAM181AQ8N9Y4 354 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 B3GALNT2Q8NCR0 500 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 TAS1R2Q8TE23 839 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 SLC35C1Q96A29 364 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 CCDC42Q96M95 316 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 B3GNT5Q9BYG0 378 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 ZNF518BQ9C0D4 1074 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 GANQ9H2C0 597 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 VRTNQ9H8Y1 702 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 ARHGAP20Q9P2F6 1191 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 MYO6Q9UM54 1294 aa13.1□□□□□ -0.31
SHMT2-230ENST00000557427 CABIN1Q9Y6J0 2220 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 A0A0U1RQJ8 604 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 TBC1D3BA6NDS4 549 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 F8VP50 259 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 TNFSF14O43557 240 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 ABL1P00519 1130 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 ADH5P11766 374 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 MATKP42679 507 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 VAV2P52735 878 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 CACNA2D1P54289 1103 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 USP46P62068 366 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 SEMG2Q02383 582 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 IFRD2Q12894 506 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-230ENST00000557427 SPA17Q15506 151 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 CCDC157Q569K6 752 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 ZNF569Q5MCW4 686 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 WDR45BQ5MNZ6 344 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 LY6G5CQ5SRR4 150 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 SFMBT2Q5VUG0 894 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 EGFLAMQ63HQ2 1017 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 DPY19L2P1Q6NXN4 242 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 KIAA1328Q86T90 577 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 NAT16Q8N8M0 369 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 EHBP1Q8NDI1 1231 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 KCNV2Q8TDN2 545 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 IPO4Q8TEX9 1081 aaKnown RBP13.09□□□□□ -0.31
SHMT2-230ENST00000557427 TAF4BQ92750 862 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 FOXJ1Q92949 421 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 TSGA10Q9BZW7 698 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 AIPL1Q9NZN9 384 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 GMIPQ9P107 970 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 DAAM1Q9Y4D1 1078 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 PCDHGB2Q9Y5G2 931 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 MRFAP1Q9Y605 127 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 SLCO1B1Q9Y6L6 691 aa13.09□□□□□ -0.31
SHMT2-230ENST00000557427 CAPN8A6NHC0 703 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 TRIM66O15016 1216 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 KRT86O43790 486 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 NDUFS2O75306 463 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 CER1O95813 267 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 ASS1P00966 412 aaKnown RBP13.08□□□□□ -0.32
SHMT2-230ENST00000557427 SERPING1P05155 500 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 NTSR1P30989 418 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 EIF4A3P38919 411 aaKnown RBP13.08□□□□□ -0.32
SHMT2-230ENST00000557427 KIF11P52732 1056 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 NDST1P52848 882 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 POLR2FP61218 127 aaKnown RBP13.08□□□□□ -0.32
SHMT2-230ENST00000557427 SLC7A9P82251 487 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 TLE3Q04726 772 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 TCERG1LQ5VWI1 586 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 HGSNATQ68CP4 663 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 GBP6Q6ZN66 633 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 DENND5BQ6ZUT9 1274 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 FMNL3Q8IVF7 1028 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 TXLNBQ8N3L3 684 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 KIAA1958Q8N8K9 716 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 C1orf216Q8TAB5 229 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 TSC1Q92574 1164 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 JAKMIP2Q96AA8 810 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 TNIP3Q96KP6 325 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 SPATA17Q96L03 361 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 MRGPRX1Q96LB2 322 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 C8orf48Q96LL4 319 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 KCNK16Q96T55 309 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 IRX2Q9BZI1 471 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-230ENST00000557427 IMPG2Q9BZV3 1241 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 MIR1-1HGQ9H1L0 117 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 APOBEC3GQ9HC16 384 aaKnown RBP13.08□□□□□ -0.32
SHMT2-230ENST00000557427 SMPD4Q9NXE4 827 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 RAD54BQ9Y620 910 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 CPQQ9Y646 472 aa13.08□□□□□ -0.32
SHMT2-230ENST00000557427 CTAGE9A4FU28 777 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms