RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 PLIN1O60240 522 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 MAP4K4O95819 1239 aaPredicted RBP4.47□□□□□ -1.69
CHD8-212ENST00000557329 HNRNPCP07910 306 aaKnown RBP eCLIP4.47□□□□□ -1.69
CHD8-212ENST00000557329 HOXA4Q00056 320 aaPredicted RBP4.47□□□□□ -1.69
CHD8-212ENST00000557329 EIF2B5Q13144 721 aaKnown RBP4.47□□□□□ -1.69
CHD8-212ENST00000557329 LLGL1Q15334 1064 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 PCID2Q5JVF3 399 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 DCAF12L1Q5VU92 463 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 C17orf99Q6UX52 265 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 MAVSQ7Z434 540 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 MICU3Q86XE3 530 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 WDR75Q8IWA0 830 aaKnown RBP4.47□□□□□ -1.69
CHD8-212ENST00000557329 SFTPA1Q8IWL2 248 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 XAGE5Q8WWM1 108 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 DAZAP1Q96EP5 407 aaKnown RBP4.47□□□□□ -1.69
CHD8-212ENST00000557329 NT5C1BQ96P26 610 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 C1QTNF1Q9BXJ1 281 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 TMEM39BQ9GZU3 492 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 COA1Q9GZY4 146 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.47□□□□□ -1.69
CHD8-212ENST00000557329 TDRD3Q9H7E2 651 aaKnown RBP4.47□□□□□ -1.69
CHD8-212ENST00000557329 CXorf36Q9H7Y0 433 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 PNPLA8Q9NP80 782 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 SNX15Q9NRS6 342 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 DLL3Q9NYJ7 618 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 FLRT1Q9NZU1 646 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 KLHL42Q9P2K6 505 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 MAFFQ9ULX9 164 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 ADAMTS5Q9UNA0 930 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 EYSQ5T1H1 3165 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 SCN9AQ15858 1988 aa4.47□□□□□ -1.69
CHD8-212ENST00000557329 DUOX1Q9NRD9 1551 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 CEMIPQ8WUJ3 1361 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 LINC01548A6NM66 108 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 H0YIZ8 118 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 THAP12O43422 761 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 RGS10O43665 173 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 C1QL1O75973 258 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 CSF1RP07333 972 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 CHRM5P08912 532 aaPredicted RBP4.46□□□□□ -1.7
CHD8-212ENST00000557329 ELFN1P0C7U0 828 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 TXNP10599 105 aaKnown RBP4.46□□□□□ -1.7
CHD8-212ENST00000557329 TPH1P17752 444 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 ACVR2AP27037 513 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 CPT1AP50416 773 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 CCT4P50991 539 aaKnown RBP4.46□□□□□ -1.7
CHD8-212ENST00000557329 TNFAIP1Q13829 316 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 GRM3Q14832 879 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 ST3GAL2Q16842 350 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 CERKLQ49MI3 558 aaPredicted RBP4.46□□□□□ -1.7
CHD8-212ENST00000557329 FAM109BQ6ICB4 259 aaPredicted RBP4.46□□□□□ -1.7
CHD8-212ENST00000557329 USP17L6PQ6QN14 398 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 ZNF788Q6ZQV5 615 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 CCDC129Q6ZRS4 1044 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 Q6ZWC4 215 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 KRT73Q86Y46 540 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 ERO1BQ86YB8 467 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 CCAR1Q8IX12 1150 aaKnown RBP4.46□□□□□ -1.7
CHD8-212ENST00000557329 CELF5Q8N6W0 485 aaKnown RBP4.46□□□□□ -1.7
CHD8-212ENST00000557329 PHKBQ93100 1093 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 VOPP1Q96AW1 172 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 ZDHHC12Q96GR4 267 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 FYTTD1Q96QD9 318 aaKnown RBP4.46□□□□□ -1.7
CHD8-212ENST00000557329 CPNE7Q9UBL6 633 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 DKK3Q9UBP4 350 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 CAPN11Q9UMQ6 739 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 ST3GAL5Q9UNP4 418 aa4.46□□□□□ -1.7
CHD8-212ENST00000557329 SPTBN5Q9NRC6 3674 aaKnown RBP4.46□□□□□ -1.7
CHD8-212ENST00000557329 LAMB4A4D0S4 1761 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 LAMB2P55268 1798 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 hCG_1984214I3L0E3 225 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 CD3EAPO15446 510 aaKnown RBP4.45□□□□□ -1.7
CHD8-212ENST00000557329 TMPRSS11DO60235 418 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 SNX2O60749 519 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 FRAT2O75474 233 aaPredicted RBP4.45□□□□□ -1.7
CHD8-212ENST00000557329 FESP07332 822 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 IDEP14735 1019 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 CYP2B6P20813 491 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 KLRK1P26718 216 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 IL1R2P27930 398 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 IGHMBP2P38935 993 aaKnown RBP4.45□□□□□ -1.7
CHD8-212ENST00000557329 MRPS5P82675 430 aaKnown RBP4.45□□□□□ -1.7
CHD8-212ENST00000557329 IFIT5Q13325 482 aaKnown RBP4.45□□□□□ -1.7
CHD8-212ENST00000557329 CLCA4Q14CN2 919 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 SHHQ15465 462 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 TMEM31Q5JXX7 168 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 DEPDC1Q5TB30 811 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 SWSAP1Q6NVH7 229 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 TRIM72Q6ZMU5 477 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 C14orf80Q86SX3 495 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 CAND1Q86VP6 1230 aaKnown RBP4.45□□□□□ -1.7
CHD8-212ENST00000557329 ZNF280BQ86YH2 543 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 ANKRD13CQ8N6S4 541 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 USP38Q8NB14 1042 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 MAML1Q92585 1016 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 TSR2Q969E8 191 aaKnown RBP4.45□□□□□ -1.7
CHD8-212ENST00000557329 ASB2Q96Q27 587 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 SNX18Q96RF0 628 aa4.45□□□□□ -1.7
CHD8-212ENST00000557329 PARK7Q99497 189 aaKnown RBP4.45□□□□□ -1.7
CHD8-212ENST00000557329 MPHOSPH8Q99549 860 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms