RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 WDR59Q6PJI9 974 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 SARM1Q6SZW1 724 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 ANKS1BQ7Z6G8 1248 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 KIAA0907Q7Z7F0 614 aaPredicted RBP11.06□□□□□ -0.64
LINC00239-201ENST00000556973 VPS36Q86VN1 386 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 LONP2Q86WA8 852 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 CHSY1Q86X52 802 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 LGI2Q8N0V4 545 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 CFAP52Q8N1V2 620 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 CCDC33Q8N5R6 958 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 ALLCQ8N6M5 410 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 EMC1Q8N766 993 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 TXNDC5Q8NBS9 432 aaKnown RBP11.06□□□□□ -0.64
LINC00239-201ENST00000556973 JOSD2Q8TAC2 188 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 OLIG1Q8TAK6 271 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 CENPIQ92674 756 aaPredicted RBP11.06□□□□□ -0.64
LINC00239-201ENST00000556973 C1orf74Q96LT6 269 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 PRICKLE1Q96MT3 831 aaPredicted RBP11.06□□□□□ -0.64
LINC00239-201ENST00000556973 PRMT1Q99873 361 aaKnown RBP11.06□□□□□ -0.64
LINC00239-201ENST00000556973 ADAM33Q9BZ11 813 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 TKTL2Q9H0I9 626 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 ISCUQ9H1K1 167 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 PARVAQ9NVD7 372 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 ELOVL2Q9NXB9 296 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 TAS2R14Q9NYV8 317 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 STIM2Q9P246 746 aa11.06□□□□□ -0.64
LINC00239-201ENST00000556973 ANKRD62A6NC57 917 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 TMCO5BA8MYB1 307 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 SGK1O00141 431 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 PAGE1O75459 146 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 ADCY5O95622 1261 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 CHRM1P11229 460 aaPredicted RBP11.05□□□□□ -0.64
LINC00239-201ENST00000556973 GPD1P21695 349 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 RRM1P23921 792 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 HLA-FP30511 346 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 HNRNPH3P31942 346 aaKnown RBP11.05□□□□□ -0.64
LINC00239-201ENST00000556973 FNTBP49356 437 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 RPS24P62847 133 aaKnown RBP11.05□□□□□ -0.64
LINC00239-201ENST00000556973 ATP11AP98196 1134 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 AUHQ13825 339 aaKnown RBP11.05□□□□□ -0.64
LINC00239-201ENST00000556973 TSR1Q2NL82 804 aaKnown RBP11.05□□□□□ -0.64
LINC00239-201ENST00000556973 TDRD12Q587J7 1177 aaKnown RBP11.05□□□□□ -0.64
LINC00239-201ENST00000556973 RABGAP1LQ5R372 815 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 PPP1R15BQ5SWA1 713 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 EGFLAMQ63HQ2 1017 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 DNAJC24Q6P3W2 148 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 STRADAQ7RTN6 431 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 WDR5BQ86VZ2 330 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 VSTM4Q8IW00 320 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 MFN1Q8IWA4 741 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 CHPFQ8IZ52 775 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 AHI1Q8N157 1196 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 CARNMT1Q8N4J0 409 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.05□□□□□ -0.64
LINC00239-201ENST00000556973 OR8K1Q8NGG5 319 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 WFIKKN2Q8TEU8 576 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 MYEOVQ96EZ4 313 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 HAPLN3Q96S86 360 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 PHOX2BQ99453 314 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 ANP32EQ9BTT0 268 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.05□□□□□ -0.64
LINC00239-201ENST00000556973 RBSNQ9H1K0 784 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 POLMQ9NP87 494 aaPredicted RBP11.05□□□□□ -0.64
LINC00239-201ENST00000556973 ABCB8Q9NUT2 735 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 POLR3BQ9NW08 1133 aaPredicted RBP11.05□□□□□ -0.64
LINC00239-201ENST00000556973 KIAA1522Q9P206 1035 aaPredicted RBP11.05□□□□□ -0.64
LINC00239-201ENST00000556973 THAP10Q9P2Z0 257 aaPredicted RBP11.05□□□□□ -0.64
LINC00239-201ENST00000556973 EBF1Q9UH73 591 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 ADAMTS1Q9UHI8 967 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 GGA2Q9UJY4 613 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 HCN2Q9UL51 889 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 HS3ST4Q9Y661 456 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 R4GN57 208 aa11.05□□□□□ -0.64
LINC00239-201ENST00000556973 H0Y626 953 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 ADAM23O75077 832 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 ALDH1A2O94788 518 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 LUC7L3O95232 432 aaKnown RBP11.04□□□□□ -0.64
LINC00239-201ENST00000556973 GJB6O95452 261 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 APBB3O95704 486 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 MYBL1P10243 752 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 PABPC1P11940 636 aaKnown RBP11.04□□□□□ -0.64
LINC00239-201ENST00000556973 DESP17661 470 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 ZNF143P52747 638 aaPredicted RBP11.04□□□□□ -0.64
LINC00239-201ENST00000556973 ATXN1P54253 815 aaKnown RBP11.04□□□□□ -0.64
LINC00239-201ENST00000556973 OXCT1P55809 520 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 DMWDQ09019 674 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 SLC12A1Q13621 1099 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 CDH18Q13634 790 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 ARID5BQ14865 1188 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 CDO1Q16878 200 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 C15orf59Q2T9L4 293 aaPredicted RBP11.04□□□□□ -0.64
LINC00239-201ENST00000556973 ARL13BQ3SXY8 428 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 C5orf22Q49AR2 442 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 TMEM215Q68D42 235 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 HEATR6Q6AI08 1181 aaKnown RBP11.04□□□□□ -0.64
LINC00239-201ENST00000556973 PLEKHA7Q6IQ23 1121 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 FBXL22Q6P050 247 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 DCUN1D2Q6PH85 259 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 TMEM92Q6UXU6 159 aa11.04□□□□□ -0.64
LINC00239-201ENST00000556973 LRRC31Q6UY01 552 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms