RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 ABCB4P21439 1286 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 CD70P32970 193 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 SGSHP51688 502 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 PDE4CQ08493 712 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 SHBQ15464 509 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 KMT5BQ4FZB7 885 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 ADGRF1Q5T601 910 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 HES3Q5TGS1 186 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 NCEH1Q6PIU2 408 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 LRRC69Q6ZNQ3 347 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 BHLHA9Q7RTU4 235 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 CCDC150Q8NCX0 1101 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 WFDC5Q8TCV5 224 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 SAP25Q8TEE9 199 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 EDEM1Q92611 657 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 GOLGA1Q92805 767 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 INTS4Q96HW7 963 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 FCRL3Q96P31 734 aaPredicted RBP9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 ULBP1Q9BZM6 244 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 UBXN6Q9BZV1 441 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 DNAI2Q9GZS0 605 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 RSPH9Q9H1X1 276 aaPredicted RBP9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 PABPC3Q9H361 631 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 EBF2Q9HAK2 575 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 EXOC1Q9NV70 894 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 FBXL12Q9NXK8 326 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 FAM13BQ9NYF5 915 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 SERGEFQ9UGK8 458 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 STOML2Q9UJZ1 356 aa9.41□□□□□ -0.9
HNRNPC-227ENST00000556897 CFAP46Q8IYW2 2715 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 COL5A1P20908 1838 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 ARID1BQ8NFD5 2236 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 A0A1W2PP55 124 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 TULP2O00295 520 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 WNT9AO14904 365 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 RRP8O43159 456 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 MSI1O43347 362 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 C1SP09871 688 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 CDK4P11802 303 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 POLR2EP19388 210 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 ACADVLP49748 655 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 RAD23BP54727 409 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 GALCP54803 685 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 SLC8A3P57103 927 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 ZNF445P59923 1031 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 FOXD4L6Q3SYB3 417 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 FOXD4L5Q5VV16 416 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 ARHGAP17Q68EM7 881 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 PM20D1Q6GTS8 502 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 FBXL19Q6PCT2 694 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 FOXD4L3Q6VB84 417 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 USP30Q70CQ3 517 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 INTS8Q75QN2 995 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 KIAA0907Q7Z7F0 614 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 ZNF605Q86T29 641 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 CEP57L1Q8IYX8 460 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 ZNF843Q8N446 348 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 EID2Q8N6I1 236 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 ANKRD52Q8NB46 1076 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 SLC4A11Q8NBS3 891 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 RNF139Q8WU17 664 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 FOXD4L4Q8WXT5 416 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 SKA1Q96BD8 255 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 PAGE5Q96GU1 130 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 TMEM176AQ96HP8 235 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 IPO9Q96P70 1041 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 NRSN2Q9GZP1 204 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 GDF3Q9NR23 364 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 AASDHPPTQ9NRN7 309 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 CISHQ9NSE2 258 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 OLA1Q9NTK5 396 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 SUN2Q9UH99 717 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 SERTAD1Q9UHV2 236 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 PCDHA7Q9UN72 937 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 NCKAP1Q9Y2A7 1128 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 HBS1LQ9Y450 684 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 TP53BP1Q12888 1972 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 MAST4O15021 2626 aa9.4□□□□□ -0.9
HNRNPC-227ENST00000556897 PLXNA2O75051 1894 aa9.4□□□□□ -0.91
HNRNPC-227ENST00000556897 MGAQ8IWI9 3026 aa9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 MYLKQ15746 1914 aa9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 GOLGA6L7A0A1B0GV03 622 aa9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 YJEFN3A6XGL0 299 aa9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 E7ENQ6 273 aa9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 MAPK13O15264 365 aa9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 MID1O15344 667 aa9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 CALUO43852 315 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 TBL1XO60907 577 aa9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 SIN3BO75182 1162 aa9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 RNASEH2AO75792 299 aaKnown RBP9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 SLFN14P0C7P3 912 aa9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 NR2F2P24468 414 aa9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 CD38P28907 300 aa9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 EPHA8P29322 1005 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 ME1P48163 572 aa9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 ARRB1P49407 418 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 ADIGQ0VDE8 80 aa9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 KCNJ12Q14500 433 aa9.39□□□□□ -0.91
HNRNPC-227ENST00000556897 RTP5Q14D33 572 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms