RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 TMEM215Q68D42 235 aa11.19□□□□□ -0.62
XRCC3-216ENST00000556682 MBLAC2Q68D91 279 aa11.19□□□□□ -0.62
XRCC3-216ENST00000556682 TCEAL6Q6IPX3 200 aa11.19□□□□□ -0.62
XRCC3-216ENST00000556682 KIAA0907Q7Z7F0 614 aaPredicted RBP11.19□□□□□ -0.62
XRCC3-216ENST00000556682 DEFB106AQ8N104 65 aa11.19□□□□□ -0.62
XRCC3-216ENST00000556682 CARNMT1Q8N4J0 409 aa11.19□□□□□ -0.62
XRCC3-216ENST00000556682 C1orf131Q8NDD1 294 aaKnown RBP11.19□□□□□ -0.62
XRCC3-216ENST00000556682 GPT2Q8TD30 523 aa11.19□□□□□ -0.62
XRCC3-216ENST00000556682 SORCS1Q8WY21 1168 aa11.19□□□□□ -0.62
XRCC3-216ENST00000556682 FOXJ1Q92949 421 aa11.19□□□□□ -0.62
XRCC3-216ENST00000556682 TCEAL3Q969E4 200 aa11.19□□□□□ -0.62
XRCC3-216ENST00000556682 ERLEC1Q96DZ1 483 aa11.19□□□□□ -0.62
XRCC3-216ENST00000556682 LSM14BQ9BX40 385 aaKnown RBP11.19□□□□□ -0.62
XRCC3-216ENST00000556682 STK33Q9BYT3 514 aa11.19□□□□□ -0.62
XRCC3-216ENST00000556682 FBRSQ9HAH7 460 aa11.19□□□□□ -0.62
XRCC3-216ENST00000556682 PLCB1Q9NQ66 1216 aa11.19□□□□□ -0.62
XRCC3-216ENST00000556682 TAB2Q9NYJ8 693 aa11.19□□□□□ -0.62
XRCC3-216ENST00000556682 RRN3Q9NYV6 651 aa11.19□□□□□ -0.62
XRCC3-216ENST00000556682 EVLQ9UI08 416 aaPredicted RBP11.19□□□□□ -0.62
XRCC3-216ENST00000556682 DAAM1Q9Y4D1 1078 aa11.19□□□□□ -0.62
XRCC3-216ENST00000556682 SDK1Q7Z5N4 2213 aa11.19□□□□□ -0.62
XRCC3-216ENST00000556682 MED19A0JLT2 244 aaPredicted RBP11.18□□□□□ -0.62
XRCC3-216ENST00000556682 KCNU1A8MYU2 1149 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 H0Y626 953 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 LUC7L3O95232 432 aaKnown RBP11.18□□□□□ -0.62
XRCC3-216ENST00000556682 IGLV3-25P01717 112 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 ASLP04424 464 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 GNSP15586 552 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 CDK11BP21127 795 aaKnown RBP11.18□□□□□ -0.62
XRCC3-216ENST00000556682 TACR2P21452 398 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 NOS2P35228 1153 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 SGSHP51688 502 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 ATXN3P54252 364 aaPredicted RBP11.18□□□□□ -0.62
XRCC3-216ENST00000556682 RPS24P62847 133 aaKnown RBP11.18□□□□□ -0.62
XRCC3-216ENST00000556682 GFPT1Q06210 699 aaPredicted RBP11.18□□□□□ -0.62
XRCC3-216ENST00000556682 CAMK2GQ13555 558 aaPredicted RBP11.18□□□□□ -0.62
XRCC3-216ENST00000556682 STX1AQ16623 288 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 TTC39BQ5VTQ0 682 aaPredicted RBP11.18□□□□□ -0.62
XRCC3-216ENST00000556682 NADSYN1Q6IA69 706 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 FAM183BPQ6ZVS7 135 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 ADIPOR2Q86V24 386 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 CHSY1Q86X52 802 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 ERICH1Q86X53 443 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 RGL4Q8IZJ4 473 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 LGI2Q8N0V4 545 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 OR2T3Q8NH03 318 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 CYB5D2Q8WUJ1 264 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 C18orf8Q96DM3 657 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 SLC2A13Q96QE2 648 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 PPP1R9BQ96SB3 815 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 NUP58Q9BVL2 599 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 MKRN2Q9H000 416 aaKnown RBP11.18□□□□□ -0.62
XRCC3-216ENST00000556682 NUCKS1Q9H1E3 243 aaKnown RBP11.18□□□□□ -0.62
XRCC3-216ENST00000556682 VPS16Q9H269 839 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 TMEM245Q9H330 911 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 TMEM9BQ9NQ34 198 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 ITM2CQ9NQX7 267 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 RXFP3Q9NSD7 469 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 DDIT4Q9NX09 232 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 KIAA1522Q9P206 1035 aaPredicted RBP11.18□□□□□ -0.62
XRCC3-216ENST00000556682 SUSD2Q9UGT4 822 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 AJAP1Q9UKB5 411 aaPredicted RBP11.18□□□□□ -0.62
XRCC3-216ENST00000556682 PILRBQ9UKJ0 227 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 STAP1Q9ULZ2 295 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 PAXBP1Q9Y5B6 917 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 FHOD1Q9Y613 1164 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 KIAA1549LQ6ZVL6 1849 aa11.18□□□□□ -0.62
XRCC3-216ENST00000556682 SPTBN4Q9H254 2564 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 SYNJ2BP-COX16A0A087WUM0 186 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 LNP1A1A4G5 178 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 C4orf47A7E2U8 309 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 PATE3B3GLJ2 98 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 GRAP2O75791 330 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 LSM8O95777 96 aaKnown RBP11.17□□□□□ -0.62
XRCC3-216ENST00000556682 ERBB2P04626 1255 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 CFIP05156 583 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 PNMA6AP0CW24 399 aaPredicted RBP11.17□□□□□ -0.62
XRCC3-216ENST00000556682 HLA-EP13747 358 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 ITPKAP23677 461 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 PRKCHP24723 683 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 CD70P32970 193 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 CDH5P33151 784 aaPredicted RBP11.17□□□□□ -0.62
XRCC3-216ENST00000556682 TPMTP51580 245 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 OXCT1P55809 520 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 IRX4P78413 519 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 ZBTB16Q05516 673 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 SFSWAPQ12872 951 aaKnown RBP11.17□□□□□ -0.62
XRCC3-216ENST00000556682 KRT31Q15323 416 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 TAF5Q15542 800 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 PPM1JQ5JR12 505 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 RABGAP1LQ5R372 815 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 CCDC183Q5T5S1 534 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 CDKAL1Q5VV42 579 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 PEAR1Q5VY43 1037 aaPredicted RBP11.17□□□□□ -0.62
XRCC3-216ENST00000556682 RNF219Q5W0B1 726 aaPredicted RBP11.17□□□□□ -0.62
XRCC3-216ENST00000556682 RAP1GAP2Q684P5 730 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 SLC23A3Q6PIS1 610 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 OLFML1Q6UWY5 402 aa11.17□□□□□ -0.62
XRCC3-216ENST00000556682 SND1Q7KZF4 910 aaKnown RBP eCLIP11.17□□□□□ -0.62
XRCC3-216ENST00000556682 SLC26A9Q7LBE3 791 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms