RNA–Protein interactions for RNA: ENST00000556587.5

SRSF5-215, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 1 (best)

Gene SRSF5, Length 1,863 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-215ENST00000556587 CRYBB1P53674 252 aaPredicted RBP13.13□□□□□ -0.31
SRSF5-215ENST00000556587 ZKSCAN8Q15776 578 aaPredicted RBP13.13□□□□□ -0.31
SRSF5-215ENST00000556587 SLC45A4Q5BKX6 768 aa13.13□□□□□ -0.31
SRSF5-215ENST00000556587 SWT1Q5T5J6 900 aaKnown RBP13.13□□□□□ -0.31
SRSF5-215ENST00000556587 CAPN12Q6ZSI9 719 aa13.13□□□□□ -0.31
SRSF5-215ENST00000556587 TRIM42Q8IWZ5 723 aa13.13□□□□□ -0.31
SRSF5-215ENST00000556587 TOP6BLQ8N6T0 577 aa13.13□□□□□ -0.31
SRSF5-215ENST00000556587 KLHL23Q8NBE8 558 aa13.13□□□□□ -0.31
SRSF5-215ENST00000556587 SLC44A1Q8WWI5 657 aa13.13□□□□□ -0.31
SRSF5-215ENST00000556587 MTBPQ96DY7 904 aa13.13□□□□□ -0.31
SRSF5-215ENST00000556587 ZMAT2Q96NC0 199 aaKnown RBP13.13□□□□□ -0.31
SRSF5-215ENST00000556587 NRDE2Q9H7Z3 1164 aa13.13□□□□□ -0.31
SRSF5-215ENST00000556587 XAB2Q9HCS7 855 aaKnown RBP13.13□□□□□ -0.31
SRSF5-215ENST00000556587 FAM49BQ9NUQ9 324 aa13.13□□□□□ -0.31
SRSF5-215ENST00000556587 FAM50BQ9Y247 325 aa13.13□□□□□ -0.31
SRSF5-215ENST00000556587 HEY1Q9Y5J3 304 aa13.13□□□□□ -0.31
SRSF5-215ENST00000556587 SMIM28A0A1B0GU29 152 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 XPO1O14980 1071 aaKnown RBP13.12□□□□□ -0.31
SRSF5-215ENST00000556587 MBTPS2O43462 519 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 DCXO43602 365 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 MGRN1O60291 552 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 HNRNPCL1O60812 293 aaKnown RBP13.12□□□□□ -0.31
SRSF5-215ENST00000556587 EDF1O60869 148 aaKnown RBP13.12□□□□□ -0.31
SRSF5-215ENST00000556587 CSPG5O95196 566 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 TPSB2P20231 275 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 IL4RP24394 825 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 CYP2F1P24903 491 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 IRS1P35568 1242 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 HDAC4P56524 1084 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 YWHAGP61981 247 aaKnown RBP eCLIP13.12□□□□□ -0.31
SRSF5-215ENST00000556587 ADAM15Q13444 863 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 TPSAB1Q15661 275 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 MSS51Q4VC12 460 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 PAN2Q504Q3 1202 aaKnown RBP13.12□□□□□ -0.31
SRSF5-215ENST00000556587 FAM133BQ5BKY9 247 aaKnown RBP13.12□□□□□ -0.31
SRSF5-215ENST00000556587 SH3PXD2AQ5TCZ1 1133 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 TTC39BQ5VTQ0 682 aaPredicted RBP13.12□□□□□ -0.31
SRSF5-215ENST00000556587 TRNP1Q6NT89 227 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 LVRNQ6Q4G3 990 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 ADGRD2Q7Z7M1 963 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 SLC26A11Q86WA9 606 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 C4orf33Q8N1A6 199 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 PQLC3Q8N755 202 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 PCDH19Q8TAB3 1148 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 DCAKDQ8WVC6 231 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 MSLNLQ96KJ4 702 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 RAB3IPQ96QF0 476 aaPredicted RBP13.12□□□□□ -0.31
SRSF5-215ENST00000556587 OSMRQ99650 979 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 EIF2AQ9BY44 585 aaKnown RBP13.12□□□□□ -0.31
SRSF5-215ENST00000556587 ABCF3Q9NUQ8 709 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 ETNK2Q9NVF9 386 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 TUBGCP4Q9UGJ1 667 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 PIN4Q9Y237 131 aaKnown RBP13.12□□□□□ -0.31
SRSF5-215ENST00000556587 UBOX5O94941 541 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 WARSP23381 471 aaKnown RBP13.12□□□□□ -0.31
SRSF5-215ENST00000556587 L1CAMP32004 1257 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 FOXN2P32314 431 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 FDFT1P37268 417 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 AIF1P55008 147 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 ADCY1Q08828 1119 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 NPNTQ6UXI9 565 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 FAM43BQ6ZT52 329 aaPredicted RBP13.12□□□□□ -0.31
SRSF5-215ENST00000556587 LIMS2Q7Z4I7 341 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 LRRC6Q86X45 466 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 CCNJLQ8IV13 435 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 BANPQ8N9N5 519 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 LRRC37BQ96QE4 947 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 TUBB6Q9BUF5 446 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 IQCGQ9H095 443 aaKnown RBP13.12□□□□□ -0.31
SRSF5-215ENST00000556587 ECT2Q9H8V3 914 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 SLC38A7Q9NVC3 462 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 AP4E1Q9UPM8 1137 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 CHMP2BQ9UQN3 213 aa13.12□□□□□ -0.31
SRSF5-215ENST00000556587 SF3B1O75533 1304 aaKnown RBP eCLIP13.11□□□□□ -0.317e-7■■■□□ 16.3
SRSF5-215ENST00000556587 USP34Q70CQ2 3546 aa13.11□□□□□ -0.31
SRSF5-215ENST00000556587 TCRBV7S3A2A0A539 114 aa13.11□□□□□ -0.31
SRSF5-215ENST00000556587 TCRBV9S1A1TA0A576 114 aa13.11□□□□□ -0.31
SRSF5-215ENST00000556587 C9IYK1 514 aa13.11□□□□□ -0.31
SRSF5-215ENST00000556587 PIK3R2O00459 728 aa13.11□□□□□ -0.31
SRSF5-215ENST00000556587 KRT38O76015 456 aa13.11□□□□□ -0.31
SRSF5-215ENST00000556587 CNTFP26441 200 aa13.11□□□□□ -0.31
SRSF5-215ENST00000556587 RBL1P28749 1068 aa13.11□□□□□ -0.31
SRSF5-215ENST00000556587 MATKP42679 507 aa13.11□□□□□ -0.31
SRSF5-215ENST00000556587 SERPINB9P50453 376 aa13.11□□□□□ -0.31
SRSF5-215ENST00000556587 DNAJC3Q13217 504 aa13.11□□□□□ -0.31
SRSF5-215ENST00000556587 SMAD4Q13485 552 aaKnown RBP13.11□□□□□ -0.31
SRSF5-215ENST00000556587 SLC25A52Q3SY17 297 aa13.11□□□□□ -0.31
SRSF5-215ENST00000556587 PPP6R3Q5H9R7 873 aaPredicted RBP13.11□□□□□ -0.31
SRSF5-215ENST00000556587 HEATR6Q6AI08 1181 aaKnown RBP13.11□□□□□ -0.31
SRSF5-215ENST00000556587 CYS1Q717R9 158 aa13.11□□□□□ -0.31
SRSF5-215ENST00000556587 PDZD4Q76G19 769 aaPredicted RBP13.11□□□□□ -0.31
SRSF5-215ENST00000556587 CHSY1Q86X52 802 aa13.11□□□□□ -0.31
SRSF5-215ENST00000556587 POF1BQ8WVV4 589 aa13.11□□□□□ -0.31
SRSF5-215ENST00000556587 ZNF75CPQ92670 426 aaPredicted RBP13.11□□□□□ -0.31
SRSF5-215ENST00000556587 KLHL29Q96CT2 875 aa13.11□□□□□ -0.31
SRSF5-215ENST00000556587 HNRNPABQ99729 332 aaKnown RBP13.11□□□□□ -0.31
SRSF5-215ENST00000556587 TACO1Q9BSH4 297 aaKnown RBP13.11□□□□□ -0.31
SRSF5-215ENST00000556587 DHX35Q9H5Z1 703 aaKnown RBP13.11□□□□□ -0.31
SRSF5-215ENST00000556587 IGFLR1Q9H665 355 aa13.11□□□□□ -0.31
SRSF5-215ENST00000556587 C10orf88Q9H8K7 445 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms