RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 RIF1Q5UIP0 2472 aaKnown RBP10.02□□□□□ -0.81
SRP54-210ENST00000556380 VPS13AQ96RL7 3174 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 SIGLEC16A6NMB1 481 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.01□□□□□ -0.81
SRP54-210ENST00000556380 CHURC1-FNTBB4DL54 471 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 NEDD8-MDP1E9PL57 170 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 M0QYT0 321 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 KAT7O95251 611 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 ADCY5O95622 1261 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 SERPING1P05155 500 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 PLEKP08567 350 aaPredicted RBP10.01□□□□□ -0.81
SRP54-210ENST00000556380 SLC2A3P11169 496 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 TDGF1P13385 188 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 RRM1P23921 792 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 HOXD9P28356 352 aaPredicted RBP10.01□□□□□ -0.81
SRP54-210ENST00000556380 CCR1P32246 355 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 GBP1P32455 592 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 RFC1P35251 1148 aaPredicted RBP10.01□□□□□ -0.81
SRP54-210ENST00000556380 TNFRSF4P43489 277 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 SLC11A2P49281 568 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 SGSHP51688 502 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 ASTE1Q2TB18 679 aaPredicted RBP10.01□□□□□ -0.81
SRP54-210ENST00000556380 CCDC14Q49A88 953 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 FBXO43Q4G163 708 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 MPPE1Q53F39 396 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 RFWD3Q6PCD5 774 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 DNAAF5Q86Y56 855 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 SPEM1Q8N4L4 309 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 EMC1Q8N766 993 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 C3orf20Q8ND61 904 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 RXFP2Q8WXD0 754 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 NELL1Q92832 810 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 EXOC4Q96A65 974 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 TMA16Q96EY4 203 aaKnown RBP10.01□□□□□ -0.81
SRP54-210ENST00000556380 LMLNQ96KR4 655 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 BTN2A3PQ96KV6 586 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 TBCBQ99426 244 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 PRRX2Q99811 253 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 FAM204AQ9H8W3 233 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 PRMT8Q9NR22 394 aaPredicted RBP10.01□□□□□ -0.81
SRP54-210ENST00000556380 ARHGEF4Q9NR80 690 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 METTL5Q9NRN9 209 aaKnown RBP10.01□□□□□ -0.81
SRP54-210ENST00000556380 SEPT11Q9NVA2 429 aaKnown RBP10.01□□□□□ -0.81
SRP54-210ENST00000556380 DDIT4Q9NX09 232 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 ARHGEF38Q9NXL2 777 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 PLK2Q9NYY3 685 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 ARHGAP20Q9P2F6 1191 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 NENFQ9UMX5 172 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 SLC27A6Q9Y2P4 619 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 STARD13Q9Y3M8 1113 aa10.01□□□□□ -0.81
SRP54-210ENST00000556380 PRRT4C9JH25 899 aa10□□□□□ -0.81
SRP54-210ENST00000556380 ZBTB24O43167 697 aaPredicted RBP10□□□□□ -0.81
SRP54-210ENST00000556380 TSPAN3O60637 253 aa10□□□□□ -0.81
SRP54-210ENST00000556380 RTN2O75298 545 aa10□□□□□ -0.81
SRP54-210ENST00000556380 PAPSS2O95340 614 aaPredicted RBP10□□□□□ -0.81
SRP54-210ENST00000556380 F9P00740 461 aa10□□□□□ -0.81
SRP54-210ENST00000556380 FTLP02792 175 aaPredicted RBP10□□□□□ -0.81
SRP54-210ENST00000556380 APODP05090 189 aa10□□□□□ -0.81
SRP54-210ENST00000556380 KRT3P12035 628 aa10□□□□□ -0.81
SRP54-210ENST00000556380 PDGFRAP16234 1089 aa10□□□□□ -0.81
SRP54-210ENST00000556380 PTPN9P43378 593 aa10□□□□□ -0.81
SRP54-210ENST00000556380 KIR2DL1P43626 348 aaPredicted RBP10□□□□□ -0.81
SRP54-210ENST00000556380 ZNF75DP51815 510 aa10□□□□□ -0.81
SRP54-210ENST00000556380 ATXN1P54253 815 aaKnown RBP10□□□□□ -0.81
SRP54-210ENST00000556380 NME3Q13232 169 aa10□□□□□ -0.81
SRP54-210ENST00000556380 MAMLD1Q13495 774 aa10□□□□□ -0.81
SRP54-210ENST00000556380 TRIM14Q14142 442 aa10□□□□□ -0.81
SRP54-210ENST00000556380 ANGPT1Q15389 498 aa10□□□□□ -0.81
SRP54-210ENST00000556380 C5orf22Q49AR2 442 aa10□□□□□ -0.81
SRP54-210ENST00000556380 RAB6CQ53S08 254 aa10□□□□□ -0.81
SRP54-210ENST00000556380 MS4A13Q5J8X5 152 aa10□□□□□ -0.81
SRP54-210ENST00000556380 MPP7Q5T2T1 576 aa10□□□□□ -0.81
SRP54-210ENST00000556380 SH3PXD2AQ5TCZ1 1133 aa10□□□□□ -0.81
SRP54-210ENST00000556380 EMC10Q5UCC4 262 aa10□□□□□ -0.81
SRP54-210ENST00000556380 PLEKHA7Q6IQ23 1121 aa10□□□□□ -0.81
SRP54-210ENST00000556380 PPP1R2P3Q6NXS1 205 aa10□□□□□ -0.81
SRP54-210ENST00000556380 KIAA0907Q7Z7F0 614 aaPredicted RBP10□□□□□ -0.81
SRP54-210ENST00000556380 ZNF683Q8IZ20 524 aa10□□□□□ -0.81
SRP54-210ENST00000556380 TERB1Q8NA31 727 aa10□□□□□ -0.81
SRP54-210ENST00000556380 OR8K1Q8NGG5 319 aa10□□□□□ -0.81
SRP54-210ENST00000556380 USP33Q8TEY7 942 aa10□□□□□ -0.81
SRP54-210ENST00000556380 BHMTQ93088 406 aa10□□□□□ -0.81
SRP54-210ENST00000556380 CFAP57Q96MR6 1250 aa10□□□□□ -0.81
SRP54-210ENST00000556380 PRICKLE1Q96MT3 831 aaPredicted RBP10□□□□□ -0.81
SRP54-210ENST00000556380 XPO6Q96QU8 1125 aaKnown RBP10□□□□□ -0.81
SRP54-210ENST00000556380 USB1Q9BQ65 265 aaKnown RBP10□□□□□ -0.81
SRP54-210ENST00000556380 SLC2A11Q9BYW1 496 aa10□□□□□ -0.81
SRP54-210ENST00000556380 RAB6CQ9H0N0 254 aa10□□□□□ -0.81
SRP54-210ENST00000556380 DNAJC17Q9NVM6 304 aaKnown RBP10□□□□□ -0.81
SRP54-210ENST00000556380 TMEM51Q9NW97 253 aa10□□□□□ -0.81
SRP54-210ENST00000556380 SPATA6Q9NWH7 488 aaPredicted RBP10□□□□□ -0.81
SRP54-210ENST00000556380 ADAMTS1Q9UHI8 967 aa10□□□□□ -0.81
SRP54-210ENST00000556380 STAP1Q9ULZ2 295 aa10□□□□□ -0.81
SRP54-210ENST00000556380 HCN4Q9Y3Q4 1203 aa10□□□□□ -0.81
SRP54-210ENST00000556380 EP300Q09472 2414 aaPredicted RBP9.99□□□□□ -0.81
SRP54-210ENST00000556380 ZNF292O60281 2723 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 MYO15AQ9UKN7 3530 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 SYNJ2BP-COX16A0A087WUM0 186 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 A0A087X0T9 212 aa9.99□□□□□ -0.81
SRP54-210ENST00000556380 TBC1D3BA6NDS4 549 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms