RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 DMWDQ09019 674 aa3.81□□□□□ -1.8
SCFD1-218ENST00000556256 ANXA2RQ3ZCQ2 193 aa3.81□□□□□ -1.8
SCFD1-218ENST00000556256 ZNF672Q499Z4 452 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-218ENST00000556256 FAM102BQ5T8I3 360 aa3.81□□□□□ -1.8
SCFD1-218ENST00000556256 ZNF474Q6S9Z5 364 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-218ENST00000556256 MAEAQ7L5Y9 396 aa3.81□□□□□ -1.8
SCFD1-218ENST00000556256 YAF2Q8IY57 180 aa3.81□□□□□ -1.8
SCFD1-218ENST00000556256 SLC35G2Q8TBE7 412 aa3.81□□□□□ -1.8
SCFD1-218ENST00000556256 ZFPM2Q8WW38 1151 aa3.81□□□□□ -1.8
SCFD1-218ENST00000556256 TSR2Q969E8 191 aaKnown RBP3.81□□□□□ -1.8
SCFD1-218ENST00000556256 AFF4Q9UHB7 1163 aaKnown RBP3.81□□□□□ -1.8
SCFD1-218ENST00000556256 TCEAL9Q9UHQ7 104 aa3.81□□□□□ -1.8
SCFD1-218ENST00000556256 ZNF180Q9UJW8 692 aa3.81□□□□□ -1.8
SCFD1-218ENST00000556256 PNMA8BQ9ULN7 279 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-218ENST00000556256 CAPN11Q9UMQ6 739 aa3.81□□□□□ -1.8
SCFD1-218ENST00000556256 DTX4Q9Y2E6 619 aa3.81□□□□□ -1.8
SCFD1-218ENST00000556256 PRPF3O43395 683 aaKnown RBP3.8□□□□□ -1.8
SCFD1-218ENST00000556256 INMTO95050 263 aa3.8□□□□□ -1.8
SCFD1-218ENST00000556256 GLUD1P00367 558 aa3.8□□□□□ -1.8
SCFD1-218ENST00000556256 KLKB1P03952 638 aa3.8□□□□□ -1.8
SCFD1-218ENST00000556256 LCATP04180 440 aa3.8□□□□□ -1.8
SCFD1-218ENST00000556256 STAT6P42226 847 aa3.8□□□□□ -1.8
SCFD1-218ENST00000556256 RFX5P48382 616 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-218ENST00000556256 GLUD2P49448 558 aa3.8□□□□□ -1.8
SCFD1-218ENST00000556256 RPS16P62249 146 aaKnown RBP3.8□□□□□ -1.8
SCFD1-218ENST00000556256 TRAF1Q13077 416 aa3.8□□□□□ -1.8
SCFD1-218ENST00000556256 CXorf57Q6NSI4 855 aaKnown RBP3.8□□□□□ -1.8
SCFD1-218ENST00000556256 TCEAL8Q8IYN2 117 aa3.8□□□□□ -1.8
SCFD1-218ENST00000556256 ADAMTS14Q8WXS8 1223 aa3.8□□□□□ -1.8
SCFD1-218ENST00000556256 TAF15Q92804 592 aaKnown RBP eCLIP3.8□□□□□ -1.8
SCFD1-218ENST00000556256 HES6Q96HZ4 224 aa3.8□□□□□ -1.8
SCFD1-218ENST00000556256 CLMNQ96JQ2 1002 aa3.8□□□□□ -1.8
SCFD1-218ENST00000556256 FAM227BQ96M60 508 aa3.8□□□□□ -1.8
SCFD1-218ENST00000556256 C1QTNF4Q9BXJ3 329 aa3.8□□□□□ -1.8
SCFD1-218ENST00000556256 C22orf23Q9BZE7 217 aa3.8□□□□□ -1.8
SCFD1-218ENST00000556256 SPRY4Q9C004 299 aa3.8□□□□□ -1.8
SCFD1-218ENST00000556256 TRIM2Q9C040 744 aa3.8□□□□□ -1.8
SCFD1-218ENST00000556256 RETREG1Q9H6L5 497 aa3.8□□□□□ -1.8
SCFD1-218ENST00000556256 KRCC1Q9NPI7 259 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-218ENST00000556256 MMP24Q9Y5R2 645 aa3.8□□□□□ -1.8
SCFD1-218ENST00000556256 GAGE12JA6NER3 117 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 PRR23AA6NEV1 266 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 ISM1B1AKI9 464 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 KCNQ3O43525 872 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 TUSC2O75896 110 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 PRSS2P07478 247 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 SP1P08047 785 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 BRAFP15056 766 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 MATN1P21941 496 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 IGHMBP2P38935 993 aaKnown RBP3.79□□□□□ -1.8
SCFD1-218ENST00000556256 RASSF2P50749 326 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 POU3F1Q03052 451 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-218ENST00000556256 GLE1Q53GS7 698 aaKnown RBP3.79□□□□□ -1.8
SCFD1-218ENST00000556256 CEP85LQ5SZL2 805 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 ZNF449Q6P9G9 518 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 SLC16A12Q6ZSM3 486 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 MAGEB6Q8N7X4 407 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 FAM47BQ8NA70 645 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 ASB12Q8WXK4 309 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 C8orf48Q96LL4 319 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 COL20A1Q9P218 1284 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 ITGB1BP2Q9UKP3 347 aa3.79□□□□□ -1.8
SCFD1-218ENST00000556256 ERI2A8K979 691 aaKnown RBP3.78□□□□□ -1.8
SCFD1-218ENST00000556256 CBFA2T3O75081 653 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 KRT36O76013 467 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 IGLV2-11P01706 119 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 MYBP10242 640 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 FCGR1AP12314 374 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 ELF2Q15723 593 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 CNGA2Q16280 664 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 KIAA1755Q5JYT7 1200 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 CCDC181Q5TID7 509 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 WBP2NLQ6ICG8 309 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 LRIG3Q6UXM1 1119 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 MEX3BQ6ZN04 569 aaKnown RBP3.78□□□□□ -1.8
SCFD1-218ENST00000556256 UNC13DQ70J99 1090 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 EPM2AIP1Q7L775 607 aaPredicted RBP3.78□□□□□ -1.8
SCFD1-218ENST00000556256 TPH2Q8IWU9 490 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 MYO1HQ8N1T3 1032 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 ZBTB34Q8NCN2 500 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 LRGUKQ96M69 825 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 AIFM3Q96NN9 605 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 TAAR9Q96RI9 348 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 B3GNT5Q9BYG0 378 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 NMRK2Q9NPI5 230 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 TBC1D14Q9P2M4 693 aa3.78□□□□□ -1.8
SCFD1-218ENST00000556256 A0A1B0GVY2 172 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 SLC16A5O15375 505 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 SERPINB2P05120 415 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 CT47B1P0C2W7 299 aaPredicted RBP3.77□□□□□ -1.81
SCFD1-218ENST00000556256 RFPL3SP0C7P2 107 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 ARSBP15848 533 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 HSPA6P17066 643 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 SLC8A1P32418 973 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 TAF6P49848 677 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 KRTAP10-3P60369 221 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 SEC61A1P61619 476 aaKnown RBP3.77□□□□□ -1.81
SCFD1-218ENST00000556256 FMO1Q01740 532 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 DSC1Q08554 894 aa3.77□□□□□ -1.81
SCFD1-218ENST00000556256 BFSP2Q13515 415 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms