RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 GLUD2P49448 558 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 NRG1Q02297 640 aaPredicted RBP9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 DSG1Q02413 1049 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 IFRD2Q12894 506 aaPredicted RBP9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 DUSP4Q13115 394 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 PPP2R5DQ14738 602 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 KYNUQ16719 465 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 FNBP1LQ5T0N5 605 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 DENND2CQ68D51 928 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 CEP128Q6ZU80 1094 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 DENND5BQ6ZUT9 1274 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 BZW1Q7L1Q6 419 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 CCDC25Q86WR0 208 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 ARHGAP18Q8N392 663 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 GPR152Q8TDT2 470 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 TLCD1Q96CP7 247 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 PKNOX2Q96KN3 472 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 ATP6V1G3Q96LB4 118 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 CEP295NLQ96MC4 621 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 RBM15Q96T37 977 aaKnown RBP eCLIP9.78□□□□□ -0.841e-17■■■■■ 48.5
HNRNPC-223ENST00000556142 WDR83Q9BRX9 315 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 HERC2P3Q9BVR0 1158 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 TTLL2Q9BWV7 592 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 ROPN1BQ9BZX4 212 aaPredicted RBP9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 PRDM12Q9H4Q4 367 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 ROPN1Q9HAT0 212 aaPredicted RBP9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 TMEM51Q9NW97 253 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 PSD3Q9NYI0 1048 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 NUDT5Q9UKK9 219 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 RAD54BQ9Y620 910 aa9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 MRPL42Q9Y6G3 142 aaKnown RBP9.78□□□□□ -0.84
HNRNPC-223ENST00000556142 GOLGA6CA6NDK9 693 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 SLC38A8A6NNN8 435 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 HMGB1P1B2RPK0 211 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 CHADO15335 359 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 EIF3HO15372 352 aaKnown RBP eCLIP9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 MSI1O43347 362 aaKnown RBP9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 TCEA3O75764 348 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 BAIAP3O94812 1187 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 LRIG2O94898 1065 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 ABHD2P08910 425 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 GOLGA6DP0CG33 693 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 ACRP10323 421 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 RPL17P18621 184 aaKnown RBP9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 TPI1P60174 286 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 TAF10Q12962 218 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 FASTKD3Q14CZ7 662 aaKnown RBP9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 CCDC85BQ15834 202 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 PSMD5Q16401 504 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 MGAT5BQ3V5L5 792 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 MSS51Q4VC12 460 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 C4orf22Q6V702 233 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 ZNF683Q8IZ20 524 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 TMEM199Q8N511 208 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 ZNF276Q8N554 614 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 SH2D3CQ8N5H7 860 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 CCDC33Q8N5R6 958 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 NPWQ8N729 165 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 COLGALT1Q8NBJ5 622 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 NETO2Q8NC67 525 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 CCDC110Q8TBZ0 833 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 TFB1MQ8WVM0 346 aaKnown RBP9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 EXOC4Q96A65 974 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 FCRL2Q96LA5 508 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 ZNF558Q96NG5 402 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 ETNK1Q9HBU6 452 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 SAYSD1Q9NPB0 183 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 IL23AQ9NPF7 189 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 GOLGA6AQ9NYA3 693 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 CLIC5Q9NZA1 410 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 HSFX1Q9UBD0 423 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 OR12D3Q9UGF7 316 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 HCN4Q9Y3Q4 1203 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 ARIH1Q9Y4X5 557 aaPredicted RBP9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 BDP1A6H8Y1 2624 aa9.77□□□□□ -0.85
HNRNPC-223ENST00000556142 CHD9Q3L8U1 2897 aa9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 LILRB3O75022 631 aa9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 PAGE1O75459 146 aa9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 SEC24AO95486 1093 aa9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 METTL18O95568 372 aa9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 MYZAPP0CAP1 466 aa9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 CCR1P32246 355 aa9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 HTR7P34969 479 aa9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 OR1D2P34982 312 aa9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 RPL10AP62906 217 aaKnown RBP9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 SKOR1P84550 965 aa9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 WASHC5Q12768 1159 aa9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 PDK1Q15118 436 aa9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 SNX30Q5VWJ9 437 aa9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 KCTD16Q68DU8 428 aa9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 MAMSTRQ6ZN01 415 aa9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 C14orf80Q86SX3 495 aa9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 DDX53Q86TM3 631 aaKnown RBP9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 CCDC13Q8IYE1 715 aa9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 AGGF1Q8N302 714 aaeCLIP9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 GOLGA6L1Q8N7Z2 621 aa9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 UHMK1Q8TAS1 419 aaKnown RBP9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 ZSCAN18Q8TBC5 510 aaPredicted RBP9.76□□□□□ -0.85
HNRNPC-223ENST00000556142 HTR3CQ8WXA8 447 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms