RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 NRP1O14786 923 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 RASGRF2O14827 1237 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 SYN3O14994 580 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 TRAPPC3O43617 180 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 GCATO75600 419 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 PARNO95453 639 aaKnown RBP8.59□□□□□ -1.03
ATXN3-235ENST00000556082 SHBGP04278 402 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 ZSCAN5DPP0CG00 497 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 ETS1P14921 441 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 TFE3P19532 575 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-235ENST00000556082 CYP2F1P24903 491 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 ADRA1BP35368 520 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 VPS41P49754 854 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 NDUFV1P49821 464 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 SULT1E1P49888 294 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 DYNLT1P63172 113 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 TSPY1Q01534 308 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 SPEM2Q0P670 501 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 AUHQ13825 339 aaKnown RBP8.59□□□□□ -1.03
ATXN3-235ENST00000556082 GPNMBQ14956 572 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 KYNUQ16719 465 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 CA9Q16790 459 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 KCTD19Q17RG1 926 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-235ENST00000556082 PLEKHG4Q58EX7 1191 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 DCAF6Q58WW2 860 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 PRRT3Q5FWE3 981 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 CLLU1OSQ5K130 101 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 TBCELQ5QJ74 424 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 OTUD1Q5VV17 481 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-235ENST00000556082 OVOS1Q6IE37 1185 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 DARS2Q6PI48 645 aaKnown RBP8.59□□□□□ -1.03
ATXN3-235ENST00000556082 C4orf50Q6ZRC1 276 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 CENPUQ71F23 418 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 ZNF771Q7L3S4 317 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-235ENST00000556082 BHLHA9Q7RTU4 235 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 CCDC25Q86WR0 208 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 CDKL3Q8IVW4 592 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-235ENST00000556082 UNC45BQ8IWX7 931 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 SH2D3CQ8N5H7 860 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 LINC01599Q8WXQ3 324 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 APBB2Q92870 758 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 MYLPFQ96A32 169 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 CENPTQ96BT3 561 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 CSPG4P5Q96PW8 444 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 ULBP1Q9BZM6 244 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 DMAP1Q9NPF5 467 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-235ENST00000556082 PAK6Q9NQU5 681 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-235ENST00000556082 PRDM10Q9NQV6 1147 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 CWC15Q9P013 229 aaKnown RBP8.59□□□□□ -1.03
ATXN3-235ENST00000556082 PAK5Q9P286 719 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 CACNG4Q9UBN1 327 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 FETUBQ9UGM5 382 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 LGALS13Q9UHV8 139 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 ZMYND8Q9ULU4 1186 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-235ENST00000556082 AP4E1Q9UPM8 1137 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 TIMM13Q9Y5L4 95 aaPredicted RBP8.59□□□□□ -1.03
ATXN3-235ENST00000556082 RAD54BQ9Y620 910 aa8.59□□□□□ -1.03
ATXN3-235ENST00000556082 C5orf60A6NFR6 353 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 YJEFN3A6XGL0 299 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 E7ENQ6 273 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 E7EVH7 732 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 H3BRJ5 948 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 H7C0C1 242 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 M0QYT0 321 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 CHADO15335 359 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 RGS16O15492 202 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-235ENST00000556082 DGKIO75912 1065 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 DDHD2O94830 711 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 IFNB1P01574 187 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 LTFP02788 710 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 IVLP07476 585 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 ATP5DP30049 168 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 CYP2C18P33260 490 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 ARL4AP40617 200 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 MDH1P40925 334 aaKnown RBP8.58□□□□□ -1.04
ATXN3-235ENST00000556082 BRCC3P46736 316 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 ATP5OP48047 213 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 CXCR3P49682 368 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 CTCFP49711 727 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-235ENST00000556082 CDR1P51861 262 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 ARL4CP56559 192 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 MAGOHP61326 146 aaKnown RBP8.58□□□□□ -1.04
ATXN3-235ENST00000556082 PPP2R2AP63151 447 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 YWHAHQ04917 246 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-235ENST00000556082 DEUP1Q05D60 604 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 SFSWAPQ12872 951 aaKnown RBP8.58□□□□□ -1.04
ATXN3-235ENST00000556082 EIF4EBP2Q13542 120 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-235ENST00000556082 MRPL58Q14197 206 aaKnown RBP8.58□□□□□ -1.04
ATXN3-235ENST00000556082 NFE2Q16621 373 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-235ENST00000556082 SLC45A4Q5BKX6 768 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 SYPL2Q5VXT5 272 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 PPP1R21Q6ZMI0 780 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 PRUNE1Q86TP1 453 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 LRRTM3Q86VH5 581 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 ZNF280BQ86YH2 543 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 TDRPQ86YL5 185 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 RIBC1Q8N443 379 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-235ENST00000556082 CCDC185Q8N715 623 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 FAM71DQ8N9W8 422 aa8.58□□□□□ -1.04
ATXN3-235ENST00000556082 OR10T2Q8NGX3 314 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms