RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 VPS45Q9NRW7 570 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 LUZP4Q9P127 313 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 SEMA5BQ9P283 1151 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 ING1Q9UK53 422 aaPredicted RBP3.85□□□□□ -1.79
SRP54-209ENST00000555746 ST3GAL5Q9UNP4 418 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 PCDHGB3Q9Y5G1 929 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 DMRT1Q9Y5R6 373 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 SPAG9O60271 1321 aaKnown RBP3.85□□□□□ -1.79
SRP54-209ENST00000555746 MST1RQ04912 1400 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 NEXMIFQ5QGS0 1516 aa3.85□□□□□ -1.79
SRP54-209ENST00000555746 RGPD3A6NKT7 1758 aaPredicted RBP3.84□□□□□ -1.79
SRP54-209ENST00000555746 RGPD4Q7Z3J3 1758 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 EFCAB8A8MWE9 144 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 H3BNC9 293 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 H7C1Q1 480 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 M0QZQ0 153 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 SUV39H1O43463 412 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 CREB3O43889 395 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 JTBO76095 146 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 LARGE1O95461 756 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 CER1O95813 267 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 FSHBP01225 129 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 GYS1P13807 737 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 HSD3B1P14060 373 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 FPR3P25089 353 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 CCT5P48643 541 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 CYP4F2P78329 520 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 GPC5P78333 572 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 CFHR3Q02985 330 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 SEMA3BQ13214 749 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 RAPGEF1Q13905 1077 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 FAM187BQ17R55 369 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 ZNF362Q5T0B9 420 aaPredicted RBP3.84□□□□□ -1.79
SRP54-209ENST00000555746 TTC22Q5TAA0 569 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 ACSM6Q6P461 480 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 NFRKBQ6P4R8 1299 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 KIRREL2Q6UWL6 708 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 RINLQ6ZS11 566 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 RFX8Q6ZV50 586 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 RAB11FIP2Q7L804 512 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 SLC29A4Q7RTT9 530 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 BCDIN3DQ7Z5W3 292 aaKnown RBP3.84□□□□□ -1.79
SRP54-209ENST00000555746 RASAL3Q86YV0 1011 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 P3H2Q8IVL5 708 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 CCDC117Q8IWD4 279 aaPredicted RBP3.84□□□□□ -1.79
SRP54-209ENST00000555746 TERB1Q8NA31 727 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 SLC16A11Q8NCK7 471 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 GPR150Q8NGU9 434 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 SPPL3Q8TCT6 385 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 SLC22A17Q8WUG5 538 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 GLMPQ8WWB7 406 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 SARAFQ96BY9 339 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 SDCCAG3Q96C92 435 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 EDC3Q96F86 508 aaKnown RBP3.84□□□□□ -1.79
SRP54-209ENST00000555746 SCLT1Q96NL6 688 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 CINPQ9BW66 212 aaPredicted RBP3.84□□□□□ -1.79
SRP54-209ENST00000555746 VPS16Q9H269 839 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 SAP30LQ9HAJ7 183 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 SAYSD1Q9NPB0 183 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 SEMA4GQ9NTN9 838 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 TLK1Q9UKI8 766 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 ADAM21Q9UKJ8 722 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 FZD4Q9ULV1 537 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 DAPP1Q9UN19 280 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 C19orf53Q9UNZ5 99 aaPredicted RBP3.84□□□□□ -1.79
SRP54-209ENST00000555746 CNTN6Q9UQ52 1028 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 UBE2J1Q9Y385 318 aaPredicted RBP3.84□□□□□ -1.79
SRP54-209ENST00000555746 DGKBQ9Y6T7 804 aa3.84□□□□□ -1.79
SRP54-209ENST00000555746 DHX57Q6P158 1386 aaKnown RBP3.84□□□□□ -1.79
SRP54-209ENST00000555746 PKD1L2Q7Z442 2459 aa3.84□□□□□ -1.8
SRP54-209ENST00000555746 CA12O43570 354 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 PDE8BO95263 885 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 SLPIP03973 132 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 HNRNPCP07910 306 aaKnown RBP eCLIP3.83□□□□□ -1.88e-8■■■■□ 23.5
SRP54-209ENST00000555746 TMIGD3P0DMS9 266 aaPredicted RBP3.83□□□□□ -1.8
SRP54-209ENST00000555746 APEHP13798 732 aaKnown RBP3.83□□□□□ -1.8
SRP54-209ENST00000555746 ZNF37AP17032 561 aaPredicted RBP3.83□□□□□ -1.8
SRP54-209ENST00000555746 MATN1P21941 496 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 DUSP1P28562 367 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 AKT1P31749 480 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 IGHMBP2P38935 993 aaKnown RBP3.83□□□□□ -1.8
SRP54-209ENST00000555746 CLK3P49761 638 aaKnown RBP3.83□□□□□ -1.8
SRP54-209ENST00000555746 RENBPP51606 427 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 LBX1P52954 281 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 CCDC15Q0P6D6 951 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 PPFIA1Q13136 1202 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 EFR3AQ14156 821 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 BTBD16Q32M84 506 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 TSTD2Q5T7W7 516 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 FAM98AQ8NCA5 519 aaKnown RBP3.83□□□□□ -1.8
SRP54-209ENST00000555746 OR52L2PQ8NGH6 319 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 PPM1EQ8WY54 764 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 THAP4Q8WY91 577 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 PRR11Q96HE9 360 aaPredicted RBP3.83□□□□□ -1.8
SRP54-209ENST00000555746 NAP1L5Q96NT1 182 aaPredicted RBP3.83□□□□□ -1.8
SRP54-209ENST00000555746 AGAP2Q99490 1192 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 EIF3CQ99613 913 aaKnown RBP3.83□□□□□ -1.8
SRP54-209ENST00000555746 CIPCQ9C0C6 399 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 FBXO28Q9NVF7 368 aa3.83□□□□□ -1.8
SRP54-209ENST00000555746 ASIC5Q9NY37 505 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms