RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 FSCN3Q9NQT6 498 aa16.01■□□□□ 0.15
SNX6-205ENST00000555648 A0A1B0GTW7 788 aa16■□□□□ 0.15
SNX6-205ENST00000555648 GTPBP10A4D1E9 387 aaKnown RBP16■□□□□ 0.15
SNX6-205ENST00000555648 H0Y626 953 aa16■□□□□ 0.15
SNX6-205ENST00000555648 DNTTP04053 509 aa16■□□□□ 0.15
SNX6-205ENST00000555648 PRKCSHP14314 528 aaPredicted RBP16■□□□□ 0.15
SNX6-205ENST00000555648 SLC6A4P31645 630 aa16■□□□□ 0.15
SNX6-205ENST00000555648 CD70P32970 193 aa16■□□□□ 0.15
SNX6-205ENST00000555648 KRT9P35527 623 aa16■□□□□ 0.15
SNX6-205ENST00000555648 RPL34P49207 117 aaKnown RBP16■□□□□ 0.15
SNX6-205ENST00000555648 COPAP53621 1224 aa16■□□□□ 0.15
SNX6-205ENST00000555648 CDK17Q00537 523 aa16■□□□□ 0.15
SNX6-205ENST00000555648 FOXC1Q12948 553 aa16■□□□□ 0.15
SNX6-205ENST00000555648 PDCLQ13371 301 aa16■□□□□ 0.15
SNX6-205ENST00000555648 CAMK2GQ13555 558 aaPredicted RBP16■□□□□ 0.15
SNX6-205ENST00000555648 TTC31Q49AM3 519 aaPredicted RBP16■□□□□ 0.15
SNX6-205ENST00000555648 MS4A13Q5J8X5 152 aa16■□□□□ 0.15
SNX6-205ENST00000555648 RNF219Q5W0B1 726 aaPredicted RBP16■□□□□ 0.15
SNX6-205ENST00000555648 TMEM110Q86TL2 294 aa16■□□□□ 0.15
SNX6-205ENST00000555648 LGI2Q8N0V4 545 aa16■□□□□ 0.15
SNX6-205ENST00000555648 MINDY1Q8N5J2 469 aa16■□□□□ 0.15
SNX6-205ENST00000555648 ZNF366Q8N895 744 aa16■□□□□ 0.15
SNX6-205ENST00000555648 ATP6V0D2Q8N8Y2 350 aa16■□□□□ 0.15
SNX6-205ENST00000555648 FIBINQ8TAL6 211 aa16■□□□□ 0.15
SNX6-205ENST00000555648 GANCQ8TET4 914 aa16■□□□□ 0.15
SNX6-205ENST00000555648 SNX19Q92543 992 aa16■□□□□ 0.15
SNX6-205ENST00000555648 TMEM245Q9H330 911 aa16■□□□□ 0.15
SNX6-205ENST00000555648 CLSTN2Q9H4D0 955 aa16■□□□□ 0.15
SNX6-205ENST00000555648 FAM204AQ9H8W3 233 aa16■□□□□ 0.15
SNX6-205ENST00000555648 DMXL1Q9Y485 3027 aa16■□□□□ 0.15
SNX6-205ENST00000555648 WDR87Q6ZQQ6 2873 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 KCNJ18B7U540 433 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 F5H5T6 163 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 PAPSS1O43252 624 aaPredicted RBP15.99■□□□□ 0.15
SNX6-205ENST00000555648 RNASEH1O60930 286 aaKnown RBP15.99■□□□□ 0.15
SNX6-205ENST00000555648 TRUB2O95900 331 aaKnown RBP15.99■□□□□ 0.15
SNX6-205ENST00000555648 ASLP04424 464 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 FYNP06241 537 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 SLC2A3P11169 496 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 ABCB4P21439 1286 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 PON1P27169 355 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 RPS24P62847 133 aaKnown RBP15.99■□□□□ 0.15
SNX6-205ENST00000555648 SHC2P98077 582 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 ZBTB16Q05516 673 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 SFSWAPQ12872 951 aaKnown RBP15.99■□□□□ 0.15
SNX6-205ENST00000555648 MAN2A1Q16706 1144 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 DCAF6Q58WW2 860 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 ZC3H12AQ5D1E8 599 aaKnown RBP15.99■□□□□ 0.15
SNX6-205ENST00000555648 EFHC1Q5JVL4 640 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 DCAF12L1Q5VU92 463 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 SYPL2Q5VXT5 272 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 NADSYN1Q6IA69 706 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 LRSAM1Q6UWE0 723 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 PASD1Q8IV76 773 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 PPP1R13BQ96KQ4 1090 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 BTN2A3PQ96KV6 586 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 ZDHHC5Q9C0B5 715 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 NUCKS1Q9H1E3 243 aaKnown RBP15.99■□□□□ 0.15
SNX6-205ENST00000555648 NUP62CLQ9H1M0 184 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 ACP6Q9NPH0 428 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.99■□□□□ 0.152e-7■■□□□ 12.7
SNX6-205ENST00000555648 KIAA1522Q9P206 1035 aaPredicted RBP15.99■□□□□ 0.15
SNX6-205ENST00000555648 DNAJC12Q9UKB3 198 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 NCKAP1Q9Y2A7 1128 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 NFE2L3Q9Y4A8 694 aa15.99■□□□□ 0.15
SNX6-205ENST00000555648 MYO18AQ92614 2054 aaKnown RBP15.98■□□□□ 0.15
SNX6-205ENST00000555648 SYNJ2BP-COX16A0A087WUM0 186 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 METTL12A8MUP2 240 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 LUC7L3O95232 432 aaKnown RBP15.98■□□□□ 0.15
SNX6-205ENST00000555648 IGLV3-19P01714 112 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 GLI1P08151 1106 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 TACR2P21452 398 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 ANP32AP39687 249 aaKnown RBP15.98■□□□□ 0.15
SNX6-205ENST00000555648 CSKP41240 450 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 BPIFB4P59827 614 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 HNRNPDQ14103 355 aaKnown RBP15.98■□□□□ 0.15
SNX6-205ENST00000555648 ST3GAL2Q16842 350 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 RAP1GAP2Q684P5 730 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 ZNF776Q68DI1 518 aaPredicted RBP15.98■□□□□ 0.15
SNX6-205ENST00000555648 OR6B2Q6IFH4 312 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 KIAA0907Q7Z7F0 614 aaPredicted RBP15.98■□□□□ 0.15
SNX6-205ENST00000555648 CFAP52Q8N1V2 620 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 ZCCHC9Q8N567 271 aaKnown RBP15.98■□□□□ 0.15
SNX6-205ENST00000555648 WFDC5Q8TCV5 224 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 DNASE2BQ8WZ79 361 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 SHC3Q92529 594 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 SLC39A13Q96H72 371 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 PRICKLE1Q96MT3 831 aaPredicted RBP15.98■□□□□ 0.15
SNX6-205ENST00000555648 BTBD1Q9H0C5 482 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 PCED1AQ9H1Q7 454 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 PRSS16Q9NQE7 514 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 DDIT4Q9NX09 232 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 COX16Q9P0S2 106 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 PCDHB9Q9Y5E1 797 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 FRYLO94915 3013 aa15.98■□□□□ 0.15
SNX6-205ENST00000555648 BECN2A8MW95 431 aa15.97■□□□□ 0.15
SNX6-205ENST00000555648 BCAT2O15382 392 aaPredicted RBP15.97■□□□□ 0.15
SNX6-205ENST00000555648 HSF2BPO75031 334 aa15.97■□□□□ 0.15
SNX6-205ENST00000555648 CCR1P32246 355 aa15.97■□□□□ 0.15
SNX6-205ENST00000555648 NNMTP40261 264 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms