RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 KRCC1Q9NPI7 259 aaPredicted RBP3.56□□□□□ -1.84
SRP54-207ENST00000555535 ZIM2Q9NZV7 527 aa3.56□□□□□ -1.84
SRP54-207ENST00000555535 RGS17Q9UGC6 210 aaPredicted RBP3.56□□□□□ -1.84
SRP54-207ENST00000555535 FZD10Q9ULW2 581 aa3.56□□□□□ -1.84
SRP54-207ENST00000555535 CAPN11Q9UMQ6 739 aa3.56□□□□□ -1.84
SRP54-207ENST00000555535 SPATA31A5Q5VU36 1347 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 SPATA31A7Q8IWB4 1347 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 TP53BP1Q12888 1972 aaPredicted RBP3.55□□□□□ -1.84
SRP54-207ENST00000555535 IGKV3D-20A0A0C4DH25 116 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 DPPA5A6NC42 116 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 AQP7P3A6NL99 342 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 BUB3O43684 328 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 CYP1A2P05177 515 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 SNRNP70P08621 437 aaKnown RBP3.55□□□□□ -1.84
SRP54-207ENST00000555535 PDGFRBP09619 1106 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 TMEM225BP0DP42 221 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 YY1P25490 414 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 RBL1P28749 1068 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 GAB1Q13480 694 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 CLCA4Q14CN2 919 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 KRTAP13-3Q3SY46 172 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 Q5PR19 223 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 PLEKHA7Q6IQ23 1121 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 MYPOPQ86VE0 399 aaPredicted RBP3.55□□□□□ -1.84
SRP54-207ENST00000555535 YAF2Q8IY57 180 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.55□□□□□ -1.84
SRP54-207ENST00000555535 ZDHHC12Q96GR4 267 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 DDX56Q9NY93 547 aaKnown RBP3.55□□□□□ -1.84
SRP54-207ENST00000555535 ITGB1BP2Q9UKP3 347 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 PTGDR2Q9Y5Y4 395 aa3.55□□□□□ -1.84
SRP54-207ENST00000555535 BMPR1BO00238 502 aa3.54□□□□□ -1.84
SRP54-207ENST00000555535 MARCH6O60337 910 aa3.54□□□□□ -1.84
SRP54-207ENST00000555535 SNX2O60749 519 aa3.54□□□□□ -1.84
SRP54-207ENST00000555535 ZBTB11O95625 1053 aaPredicted RBP3.54□□□□□ -1.84
SRP54-207ENST00000555535 ANOS1P23352 680 aa3.54□□□□□ -1.84
SRP54-207ENST00000555535 GLIPR1P48060 266 aa3.54□□□□□ -1.84
SRP54-207ENST00000555535 SOX2P48431 317 aa3.54□□□□□ -1.84
SRP54-207ENST00000555535 CLCN5P51795 746 aa3.54□□□□□ -1.84
SRP54-207ENST00000555535 KIF19Q2TAC6 998 aa3.54□□□□□ -1.84
SRP54-207ENST00000555535 AASDHQ4L235 1098 aaPredicted RBP3.54□□□□□ -1.84
SRP54-207ENST00000555535 GLE1Q53GS7 698 aaKnown RBP3.54□□□□□ -1.84
SRP54-207ENST00000555535 MEX3BQ6ZN04 569 aaKnown RBP3.54□□□□□ -1.84
SRP54-207ENST00000555535 DDIASQ8IXT1 998 aa3.54□□□□□ -1.84
SRP54-207ENST00000555535 RAVER1Q8IY67 606 aaKnown RBP3.54□□□□□ -1.84
SRP54-207ENST00000555535 EME1Q96AY2 570 aa3.54□□□□□ -1.84
SRP54-207ENST00000555535 ABHD10Q9NUJ1 306 aa3.54□□□□□ -1.84
SRP54-207ENST00000555535 TYW1Q9NV66 732 aaKnown RBP3.54□□□□□ -1.84
SRP54-207ENST00000555535 PLEKHB1Q9UF11 243 aaPredicted RBP3.54□□□□□ -1.84
SRP54-207ENST00000555535 HPSEQ9Y251 543 aa3.54□□□□□ -1.84
SRP54-207ENST00000555535 INAFM1C9JVW0 142 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 PRYO14603 147 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 SGPL1O95470 568 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 SLC3A2P08195 630 aaKnown RBP3.53□□□□□ -1.84
SRP54-207ENST00000555535 RNF224P0DH78 156 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 MYF5P13349 255 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 KRT5P13647 590 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 PBX1P40424 430 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 ERVK11-1P61568 191 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 ACSM2AQ08AH3 577 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 ACOX1Q15067 660 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 OTUD1Q5VV17 481 aaPredicted RBP3.53□□□□□ -1.84
SRP54-207ENST00000555535 BSPRYQ5W0U4 402 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 Q6ZTK2 550 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 SH2D6Q7Z4S9 175 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 P3H2Q8IVL5 708 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 FSTL5Q8N475 847 aaPredicted RBP3.53□□□□□ -1.84
SRP54-207ENST00000555535 SUN3Q8TAQ9 357 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 CELF1Q92879 486 aaKnown RBP3.53□□□□□ -1.84
SRP54-207ENST00000555535 URB1-AS1Q96HZ7 61 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 NOB1Q9ULX3 412 aaKnown RBP3.53□□□□□ -1.84
SRP54-207ENST00000555535 VPS4AQ9UN37 437 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 PCDHB2Q9Y5E7 798 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 SMAD5-AS1Q9Y6J3 95 aa3.53□□□□□ -1.84
SRP54-207ENST00000555535 EMSYQ7Z589 1322 aa3.52□□□□□ -1.85
SRP54-207ENST00000555535 CBFA2T3O75081 653 aa3.52□□□□□ -1.85
SRP54-207ENST00000555535 WDR47O94967 919 aa3.52□□□□□ -1.85
SRP54-207ENST00000555535 IBSPP21815 317 aaPredicted RBP3.52□□□□□ -1.85
SRP54-207ENST00000555535 HOXD12P35452 270 aa3.52□□□□□ -1.85
SRP54-207ENST00000555535 CARSP49589 748 aaKnown RBP3.52□□□□□ -1.85
SRP54-207ENST00000555535 VPS41P49754 854 aa3.52□□□□□ -1.85
SRP54-207ENST00000555535 GPS2Q13227 327 aa3.52□□□□□ -1.85
SRP54-207ENST00000555535 LIPMQ5VYY2 423 aa3.52□□□□□ -1.85
SRP54-207ENST00000555535 DCUN1D3Q8IWE4 304 aa3.52□□□□□ -1.85
SRP54-207ENST00000555535 ARL14EPQ8N8R7 260 aaPredicted RBP3.52□□□□□ -1.85
SRP54-207ENST00000555535 ZNF485Q8NCK3 441 aa3.52□□□□□ -1.85
SRP54-207ENST00000555535 MBD3L2Q8NHZ7 208 aaPredicted RBP3.52□□□□□ -1.85
SRP54-207ENST00000555535 SMCR8Q8TEV9 937 aaPredicted RBP3.52□□□□□ -1.85
SRP54-207ENST00000555535 APIPQ96GX9 242 aa3.52□□□□□ -1.85
SRP54-207ENST00000555535 IGSF21Q96ID5 467 aa3.52□□□□□ -1.85
SRP54-207ENST00000555535 FAM227BQ96M60 508 aa3.52□□□□□ -1.85
SRP54-207ENST00000555535 EPYCQ99645 322 aa3.52□□□□□ -1.85
SRP54-207ENST00000555535 TBC1D23Q9NUY8 699 aa3.52□□□□□ -1.85
SRP54-207ENST00000555535 ASNSD1Q9NWL6 643 aa3.52□□□□□ -1.85
SRP54-207ENST00000555535 UTS2RQ9UKP6 389 aa3.52□□□□□ -1.85
SRP54-207ENST00000555535 OGDHLQ9ULD0 1010 aa3.52□□□□□ -1.85
SRP54-207ENST00000555535 THRAP3Q9Y2W1 955 aaKnown RBP3.52□□□□□ -1.85
SRP54-207ENST00000555535 A0A1B0GVT2 93 aa3.51□□□□□ -1.85
SRP54-207ENST00000555535 F8W8V4 182 aa3.51□□□□□ -1.85
SRP54-207ENST00000555535 RGS14O43566 566 aa3.51□□□□□ -1.85
SRP54-207ENST00000555535 MAP4K4O95819 1239 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms