RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 MTSS1LQ765P7 747 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 PRRT2Q7Z6L0 340 aaPredicted RBP8.62□□□□□ -1.03
LINC00641-201ENST00000555379 ZNF555Q8NEP9 628 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 TPCN2Q8NHX9 752 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 VPS33AQ96AX1 596 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 SHDQ96IW2 340 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 MS4A14Q96JA4 679 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 INPP4AQ96PE3 977 aaPredicted RBP8.62□□□□□ -1.03
LINC00641-201ENST00000555379 TRAPPC9Q96Q05 1148 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 CEP44Q9C0F1 390 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 TASP1Q9H6P5 420 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 USP18Q9UMW8 372 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 PCDHGC5Q9Y5F6 944 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 ATRNL1Q5VV63 1379 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 FAM237AA0A1B0GTK4 181 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 TRDMT1O14717 391 aaKnown RBP8.62□□□□□ -1.03
LINC00641-201ENST00000555379 NBNO60934 754 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 PRLP01236 227 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 CLK3P49761 638 aaKnown RBP8.62□□□□□ -1.03
LINC00641-201ENST00000555379 VCPP55072 806 aaKnown RBP8.62□□□□□ -1.03
LINC00641-201ENST00000555379 ALG11Q2TAA5 492 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 ATAD3BQ5T9A4 648 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 RBM43Q6ZSC3 357 aaKnown RBP8.62□□□□□ -1.03
LINC00641-201ENST00000555379 LRRC6Q86X45 466 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 CXorf40AQ8TE69 158 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 ZNF669Q96BR6 464 aaPredicted RBP8.62□□□□□ -1.03
LINC00641-201ENST00000555379 EEF2KMTQ96G04 330 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 PLEKHA8Q96JA3 519 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 SENP8Q96LD8 212 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 TGS1Q96RS0 853 aaKnown RBP8.62□□□□□ -1.03
LINC00641-201ENST00000555379 SENP6Q9GZR1 1112 aaPredicted RBP8.62□□□□□ -1.03
LINC00641-201ENST00000555379 ING2Q9H160 280 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 SYNDIG1Q9H7V2 258 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 ATP13A1Q9HD20 1204 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 RPRD1BQ9NQG5 326 aaKnown RBP8.62□□□□□ -1.03
LINC00641-201ENST00000555379 SNTG2Q9NY99 539 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 AFF4Q9UHB7 1163 aaKnown RBP8.62□□□□□ -1.03
LINC00641-201ENST00000555379 TBK1Q9UHD2 729 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 ADAM28Q9UKQ2 775 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 MRPS23Q9Y3D9 190 aaKnown RBP8.62□□□□□ -1.03
LINC00641-201ENST00000555379 F8VZ95 297 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 CATP04040 527 aaKnown RBP8.62□□□□□ -1.03
LINC00641-201ENST00000555379 ASLP04424 464 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 KLRK1P26718 216 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 CXCR5P32302 372 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 POLD2P49005 469 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 DENND5BQ6ZUT9 1274 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 TCAIMQ8N3R3 496 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 WNT8BQ93098 351 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 ABHD8Q96I13 439 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 B3GALT6Q96L58 329 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 NIFKQ9BYG3 293 aaKnown RBP8.62□□□□□ -1.03
LINC00641-201ENST00000555379 SLC28A3Q9HAS3 691 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 CD248Q9HCU0 757 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 H2AFY2Q9P0M6 372 aaPredicted RBP8.62□□□□□ -1.03
LINC00641-201ENST00000555379 FNIP2Q9P278 1114 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 FAM153AQ9UHL3 310 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 CACNA1FO60840 1977 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 AKAP12Q02952 1782 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 BTNL10A8MVZ5 291 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 ANKRD65E5RJM6 399 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 GNB5O14775 395 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 SLITRK3O94933 977 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 FTH1P02794 183 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 FCGR1AP12314 374 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 MLNP12872 115 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 EEF1B2P24534 225 aaKnown RBP8.62□□□□□ -1.03
LINC00641-201ENST00000555379 CACNB2Q08289 660 aaPredicted RBP8.62□□□□□ -1.03
LINC00641-201ENST00000555379 ELP6Q0PNE2 266 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 TEAD4Q15561 434 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 GRAMD1BQ3KR37 738 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 ATAT1Q5SQI0 421 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 TPGS2Q68CL5 300 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 NPAS4Q8IUM7 802 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 ABCB6Q9NP58 842 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 ATXN10Q9UBB4 475 aa8.62□□□□□ -1.03
LINC00641-201ENST00000555379 WBP11Q9Y2W2 641 aaKnown RBP8.62□□□□□ -1.03
LINC00641-201ENST00000555379 A0A087X1B8 175 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 KPNA4O00629 521 aaPredicted RBP8.61□□□□□ -1.03
LINC00641-201ENST00000555379 ABL2P42684 1182 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 RPS6KA3P51812 740 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 THOP1P52888 689 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 PNLIPRP1P54315 467 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 IL1RL1Q01638 556 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 FAPQ12884 760 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 PSMD5Q16401 504 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 SPOCD1Q6ZMY3 1216 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 SV2AQ7L0J3 742 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 POLNQ7Z5Q5 900 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 TMEM110Q86TL2 294 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 PHACTR4Q8IZ21 702 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 NUP93Q8N1F7 819 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 ZFP28Q8NHY6 868 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 PDLIM2Q96JY6 352 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 ATP13A3Q9H7F0 1226 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 PSME2Q9UL46 239 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 FIS1Q9Y3D6 152 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 PCDHA3Q9Y5H8 950 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 IRF6O14896 467 aa8.61□□□□□ -1.03
LINC00641-201ENST00000555379 TLL1O43897 1013 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms