RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ATG16L1Q676U5 607 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 RETSATQ6NUM9 610 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 MRGPRGQ86SM5 289 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 ADAMTS18Q8TE60 1221 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 HTRA1Q92743 480 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 RBM17Q96I25 401 aaKnown RBP6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 PPP1R10Q96QC0 940 aaKnown RBP6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 HTATIP2Q9BUP3 242 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 GPR63Q9BZJ6 419 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 TRIM2Q9C040 744 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 SFXN1Q9H9B4 322 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 PRDM16Q9HAZ2 1276 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 CPNE5Q9HCH3 593 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 TLK1Q9UKI8 766 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 MAFFQ9ULX9 164 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 SUFUQ9UMX1 484 aa6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 SIRT4Q9Y6E7 314 aaPredicted RBP6.03□□□□□ -1.44
CKS1BP1-201ENST00000555221 KRTAP9-7A8MTY7 169 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 UBE2Q2LH0YL09 131 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 PEPDP12955 493 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 CPA1P15085 419 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 ATF7P17544 494 aaPredicted RBP6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 GPD1P21695 349 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 HOXD12P35452 270 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 THOC5Q13769 683 aaKnown RBP6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 GPR162Q16538 588 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 LRRC24Q50LG9 513 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 CBWD5Q5RIA9 395 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 ANO7Q6IWH7 933 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 DENND1BQ6P3S1 775 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 Q8N1X5 172 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 ENDOVQ8N8Q3 282 aaKnown RBP6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 LINS1Q8NG48 757 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 CLEC4CQ8WTT0 213 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 SARAFQ96BY9 339 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 ZNF845Q96IR2 970 aaPredicted RBP6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 SENP7Q9BQF6 1050 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 SLC26A6Q9BXS9 759 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 ZHX3Q9H4I2 956 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 SYNPO2LQ9H987 977 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 RMI1Q9H9A7 625 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 SH3BP4Q9P0V3 963 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 RCE1Q9Y256 329 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 B3GNT3Q9Y2A9 372 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 AFG3L2Q9Y4W6 797 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 WNT6Q9Y6F9 365 aa6.02□□□□□ -1.45
CKS1BP1-201ENST00000555221 A6NLC8 198 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 TARM1B6A8C7 271 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 GRM8O00222 908 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 PRYO14603 147 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 KLK10O43240 276 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 ANP32CO43423 234 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 CHRM5P08912 532 aaPredicted RBP6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 CSF1P09603 554 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 IFIT1P09914 478 aaKnown RBP6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 SFPQP23246 707 aaKnown RBP eCLIP6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 ELF1P32519 619 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 BUD31P41223 144 aaPredicted RBP6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 STAT6P42226 847 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 VPS41P49754 854 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 SLC37A1P57057 533 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 GOLGA8FQ08AF8 430 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 WDR45BQ5MNZ6 344 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 LCE4AQ5TA78 99 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 NAA35Q5VZE5 725 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 TSPYL6Q8N831 410 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 PPHLN1Q8NEY8 458 aaKnown RBP6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 REPS1Q96D71 796 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 HVCN1Q96D96 273 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 JMJD4Q9H9V9 463 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 ALG13Q9NP73 1137 aaKnown RBP6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 IL17RBQ9NRM6 502 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 ASNSD1Q9NWL6 643 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 PNMA2Q9UL42 364 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 GDAQ9Y2T3 454 aa6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 HEMK1Q9Y5R4 338 aaPredicted RBP6.01□□□□□ -1.45
CKS1BP1-201ENST00000555221 TCRBV5S1A1TA0A578 114 aa6□□□□□ -1.45
CKS1BP1-201ENST00000555221 POC1B-GALNT4F8VUJ3 575 aa6□□□□□ -1.45
CKS1BP1-201ENST00000555221 KAT7O95251 611 aa6□□□□□ -1.45
CKS1BP1-201ENST00000555221 ACP5P13686 325 aa6□□□□□ -1.45
CKS1BP1-201ENST00000555221 KRT9P35527 623 aa6□□□□□ -1.45
CKS1BP1-201ENST00000555221 PSMC2P35998 433 aaKnown RBP6□□□□□ -1.45
CKS1BP1-201ENST00000555221 LIFRP42702 1097 aa6□□□□□ -1.45
CKS1BP1-201ENST00000555221 INHBCP55103 352 aa6□□□□□ -1.45
CKS1BP1-201ENST00000555221 CDK18Q07002 472 aa6□□□□□ -1.45
CKS1BP1-201ENST00000555221 TBL3Q12788 808 aaKnown RBP6□□□□□ -1.45
CKS1BP1-201ENST00000555221 GAB1Q13480 694 aa6□□□□□ -1.45
CKS1BP1-201ENST00000555221 ALKBH1Q13686 389 aaKnown RBP6□□□□□ -1.45
CKS1BP1-201ENST00000555221 MAPRE1Q15691 268 aaKnown RBP6□□□□□ -1.45
CKS1BP1-201ENST00000555221 PFKFB3Q16875 520 aaPredicted RBP6□□□□□ -1.45
CKS1BP1-201ENST00000555221 CERKLQ49MI3 558 aaPredicted RBP6□□□□□ -1.45
CKS1BP1-201ENST00000555221 RUNDC3AQ59EK9 446 aa6□□□□□ -1.45
CKS1BP1-201ENST00000555221 CC2D1BQ5T0F9 858 aaKnown RBP6□□□□□ -1.45
CKS1BP1-201ENST00000555221 LIPMQ5VYY2 423 aa6□□□□□ -1.45
CKS1BP1-201ENST00000555221 SUMO4Q6EEV6 95 aa6□□□□□ -1.45
CKS1BP1-201ENST00000555221 HEATR4Q86WZ0 1026 aa6□□□□□ -1.45
CKS1BP1-201ENST00000555221 LDLRAD3Q86YD5 345 aa6□□□□□ -1.45
CKS1BP1-201ENST00000555221 C16orf71Q8IYS4 520 aaPredicted RBP6□□□□□ -1.45
CKS1BP1-201ENST00000555221 GALNT4Q8N4A0 578 aa6□□□□□ -1.45
CKS1BP1-201ENST00000555221 ARHGAP39Q9C0H5 1083 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms