RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 CCDC170Q8IYT3 715 aa10.98□□□□□ -0.65
TMEM260-206ENST00000555046 DCLK2Q8N568 766 aa10.98□□□□□ -0.65
TMEM260-206ENST00000555046 FNIP1Q8TF40 1166 aa10.98□□□□□ -0.65
TMEM260-206ENST00000555046 UCMAQ8WVF2 138 aa10.98□□□□□ -0.65
TMEM260-206ENST00000555046 WBP2Q969T9 261 aa10.98□□□□□ -0.65
TMEM260-206ENST00000555046 PIWIL1Q96J94 861 aaKnown RBP10.98□□□□□ -0.65
TMEM260-206ENST00000555046 PANX2Q96RD6 677 aa10.98□□□□□ -0.65
TMEM260-206ENST00000555046 HAPLN3Q96S86 360 aa10.98□□□□□ -0.65
TMEM260-206ENST00000555046 CNPY3Q9BT09 278 aa10.98□□□□□ -0.65
TMEM260-206ENST00000555046 FOXQ1Q9C009 403 aa10.98□□□□□ -0.65
TMEM260-206ENST00000555046 RETREG1Q9H6L5 497 aa10.98□□□□□ -0.65
TMEM260-206ENST00000555046 ARHGEF4Q9NR80 690 aa10.98□□□□□ -0.65
TMEM260-206ENST00000555046 METTL5Q9NRN9 209 aaKnown RBP10.98□□□□□ -0.65
TMEM260-206ENST00000555046 ARHGAP20Q9P2F6 1191 aa10.98□□□□□ -0.65
TMEM260-206ENST00000555046 CNOT8Q9UFF9 292 aaKnown RBP10.98□□□□□ -0.65
TMEM260-206ENST00000555046 WDFY3Q8IZQ1 3526 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 SYNJ2BP-COX16A0A087WUM0 186 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 SCAMP3O14828 347 aaKnown RBP10.97□□□□□ -0.65
TMEM260-206ENST00000555046 NPC1O15118 1278 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 ZBTB24O43167 697 aaPredicted RBP10.97□□□□□ -0.65
TMEM260-206ENST00000555046 TULP3O75386 442 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 KAT7O95251 611 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 IPO7O95373 1038 aaKnown RBP10.97□□□□□ -0.65
TMEM260-206ENST00000555046 ADCY5O95622 1261 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 MOCS2O96007 188 aaPredicted RBP10.97□□□□□ -0.65
TMEM260-206ENST00000555046 CHRNB1P11230 501 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 TARSP26639 723 aaKnown RBP10.97□□□□□ -0.65
TMEM260-206ENST00000555046 FLT3P36888 993 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 SOX9P48436 509 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 DGKGP49619 791 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 AIF1P55008 147 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 MRPS21P82921 87 aaKnown RBP10.97□□□□□ -0.65
TMEM260-206ENST00000555046 ATP11AP98196 1134 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 CCDC14Q49A88 953 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 E4F1Q66K89 784 aaPredicted RBP10.97□□□□□ -0.65
TMEM260-206ENST00000555046 SDE2Q6IQ49 451 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 WDR59Q6PJI9 974 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 TXNDC11Q6PKC3 985 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 TRMT11Q7Z4G4 463 aaKnown RBP10.97□□□□□ -0.65
TMEM260-206ENST00000555046 TMTC1Q8IUR5 882 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 SPEM1Q8N4L4 309 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 NAT16Q8N8M0 369 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 HJURPQ8NCD3 748 aaPredicted RBP10.97□□□□□ -0.65
TMEM260-206ENST00000555046 CENPIQ92674 756 aaPredicted RBP10.97□□□□□ -0.65
TMEM260-206ENST00000555046 ANP32BQ92688 251 aaKnown RBP10.97□□□□□ -0.65
TMEM260-206ENST00000555046 ZNF653Q96CK0 615 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 CFAP57Q96MR6 1250 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 TBCBQ99426 244 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 TKTL2Q9H0I9 626 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 NHEJ1Q9H9Q4 299 aaPredicted RBP10.97□□□□□ -0.65
TMEM260-206ENST00000555046 DNAJC17Q9NVM6 304 aaKnown RBP10.97□□□□□ -0.65
TMEM260-206ENST00000555046 ARHGEF38Q9NXL2 777 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 DONSONQ9NYP3 566 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 TAS2R14Q9NYV8 317 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 COX16Q9P0S2 106 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 FBXO10Q9UK96 956 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 SLC27A6Q9Y2P4 619 aa10.97□□□□□ -0.65
TMEM260-206ENST00000555046 MTF2Q9Y483 593 aaPredicted RBP10.97□□□□□ -0.65
TMEM260-206ENST00000555046 A0A087X0T9 212 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 TCRBV5S1A1TA0A578 114 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 CYSRT1A8MQ03 144 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 MYO1FO00160 1098 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 AP5Z1O43299 807 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 PI15O43692 258 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 TBL1XO60907 577 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 MOCS3O95396 460 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 DCNP07585 359 aaKnown RBP10.96□□□□□ -0.65
TMEM260-206ENST00000555046 H2AFZP0C0S5 128 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 FAM228BP0C875 321 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 TACR2P21452 398 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 CYLC1P35663 651 aaPredicted RBP10.96□□□□□ -0.65
TMEM260-206ENST00000555046 OPRD1P41143 372 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 CCR3P51677 355 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 NRLP54845 237 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 CCINQ13939 588 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 PIGHQ14442 188 aaPredicted RBP10.96□□□□□ -0.65
TMEM260-206ENST00000555046 ANGPT1Q15389 498 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 SPA17Q15506 151 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 MS4A13Q5J8X5 152 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 FYB2Q5VWT5 728 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 CWF19L1Q69YN2 538 aaKnown RBP10.96□□□□□ -0.65
TMEM260-206ENST00000555046 H2AFVQ71UI9 128 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 PHLDB2Q86SQ0 1253 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 CHSY1Q86X52 802 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 C1orf210Q8IVY1 113 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 ETFBKMTQ8IXQ9 262 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 CCDC105Q8IYK2 499 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 EMC1Q8N766 993 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 DTWD2Q8NBA8 298 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 CTNNBL1Q8WYA6 563 aaPredicted RBP10.96□□□□□ -0.65
TMEM260-206ENST00000555046 ACDQ96AP0 544 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 CHFRQ96EP1 664 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 MCEEQ96PE7 176 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 CHRDQ9H2X0 955 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 SEMA4AQ9H3S1 761 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 SPATA6Q9NWH7 488 aaPredicted RBP10.96□□□□□ -0.65
TMEM260-206ENST00000555046 MYO1AQ9UBC5 1043 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 INTUQ9ULD6 942 aa10.96□□□□□ -0.65
TMEM260-206ENST00000555046 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.95□□□□□ -0.66
TMEM260-206ENST00000555046 GOLGA6L3A6NEY3 463 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms