RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 WDR5P61964 334 aaKnown RBP9.18□□□□□ -0.94
TDP1-210ENST00000554976 IKBKEQ14164 716 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 LONRF1Q17RB8 773 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 KRT71Q3SY84 523 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 C6orf118Q5T5N4 469 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 RASIP1Q5U651 963 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 MON1AQ86VX9 555 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 NLRP14Q86W24 1093 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 CCDC13Q8IYE1 715 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 CCDC110Q8TBZ0 833 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 MAML1Q92585 1016 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 C1orf74Q96LT6 269 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 ETNK1Q9HBU6 452 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 PRDM5Q9NQX1 630 aaPredicted RBP9.18□□□□□ -0.94
TDP1-210ENST00000554976 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.18□□□□□ -0.94
TDP1-210ENST00000554976 COX16Q9P0S2 106 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 GMIPQ9P107 970 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 CTNNAL1Q9UBT7 734 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 SFMBT1Q9UHJ3 866 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 IGLV3-10A0A075B6K4 115 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 A0A0A0MRY4 1105 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 ABHD14A-ACY1A0A1B0GW23 586 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 MSI1O43347 362 aaKnown RBP9.18□□□□□ -0.94
TDP1-210ENST00000554976 DSG1Q02413 1049 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 HIF1AQ16665 826 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 ANKRD20A2Q5SQ80 823 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 ANKRD20A1Q5TYW2 823 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 PIK3R6Q5UE93 754 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 ANKRD20A3Q5VUR7 823 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 CENPUQ71F23 418 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 C16orf59Q7L2K0 433 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 CCDC33Q8N5R6 958 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 NETO2Q8NC67 525 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 P2RY11Q96G91 374 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 SPATA13Q96N96 652 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 PGLYRP2Q96PD5 576 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 CLSTN3Q9BQT9 956 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 FBXO44Q9H4M3 255 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 OR12D3Q9UGF7 316 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 NOVA2Q9UNW9 492 aaKnown RBP9.18□□□□□ -0.94
TDP1-210ENST00000554976 HS3ST4Q9Y661 456 aa9.18□□□□□ -0.94
TDP1-210ENST00000554976 SRRM3A6NNA2 597 aaPredicted RBP9.17□□□□□ -0.94
TDP1-210ENST00000554976 CREB3O43889 395 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 LILRB3O75022 631 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 MAGOHP61326 146 aaKnown RBP9.17□□□□□ -0.94
TDP1-210ENST00000554976 PDIA2Q13087 525 aaKnown RBP9.17□□□□□ -0.94
TDP1-210ENST00000554976 STAT4Q14765 748 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 ARL13BQ3SXY8 428 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 KCTD11Q693B1 232 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 CROCCP2Q86T23 111 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 EXOC3L1Q86VI1 746 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 CEP57Q86XR8 500 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 CMTR2Q8IYT2 770 aaKnown RBP9.17□□□□□ -0.94
TDP1-210ENST00000554976 FBXO22Q8NEZ5 403 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 IGSF9Q9P2J2 1179 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 ATP11BQ9Y2G3 1177 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 MIA3Q5JRA6 1907 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 A0A087WUV0 522 aaPredicted RBP9.17□□□□□ -0.94
TDP1-210ENST00000554976 GOLGA8MH3BSY2 632 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 RASGRF2O14827 1237 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 PAGE1O75459 146 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 RTN3O95197 1032 aaPredicted RBP9.17□□□□□ -0.94
TDP1-210ENST00000554976 SEC24AO95486 1093 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 SOD2P04179 222 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 CD68P34810 354 aaPredicted RBP9.17□□□□□ -0.94
TDP1-210ENST00000554976 IRAK1P51617 712 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 ARL4CP56559 192 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 PPP2R2AP63151 447 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 ZNF33AQ06730 810 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 BTBD8Q5XKL5 378 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 LRRC31Q6UY01 552 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 TMCO2Q7Z6W1 182 aaPredicted RBP9.17□□□□□ -0.94
TDP1-210ENST00000554976 ZNF567Q8N184 647 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 ARHGAP18Q8N392 663 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 COLGALT1Q8NBJ5 622 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 ATXN2LQ8WWM7 1075 aaKnown RBP9.17□□□□□ -0.94
TDP1-210ENST00000554976 PAWRQ96IZ0 340 aaKnown RBP9.17□□□□□ -0.94
TDP1-210ENST00000554976 TSGA13Q96PP4 275 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 BEGAINQ9BUH8 593 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 FRMD8Q9BZ67 464 aaPredicted RBP9.17□□□□□ -0.94
TDP1-210ENST00000554976 PRDM12Q9H4Q4 367 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 TMEM39AQ9NV64 488 aa9.17□□□□□ -0.94
TDP1-210ENST00000554976 MRPL42Q9Y6G3 142 aaKnown RBP9.17□□□□□ -0.94
TDP1-210ENST00000554976 SLC38A8A6NNN8 435 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 HMGA1P17096 107 aaKnown RBP9.16□□□□□ -0.94
TDP1-210ENST00000554976 PTPN3P26045 913 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 MDH1P40925 334 aaKnown RBP9.16□□□□□ -0.94
TDP1-210ENST00000554976 GARSP41250 739 aaKnown RBP9.16□□□□□ -0.94
TDP1-210ENST00000554976 TPI1P60174 286 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 ZBTB17Q13105 803 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 C5orf22Q49AR2 442 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 BZW1Q7L1Q6 419 aaKnown RBP9.16□□□□□ -0.94
TDP1-210ENST00000554976 CCDC91Q7Z6B0 441 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 SCN4BQ8IWT1 228 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 ZBED8Q8IZ13 594 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 RIBC1Q8N443 379 aaPredicted RBP9.16□□□□□ -0.94
TDP1-210ENST00000554976 FBXO36Q8NEA4 188 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 UHMK1Q8TAS1 419 aaKnown RBP9.16□□□□□ -0.94
TDP1-210ENST00000554976 GPR152Q8TDT2 470 aa9.16□□□□□ -0.94
TDP1-210ENST00000554976 SIGLEC10Q96LC7 697 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms