RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 ACDQ96AP0 544 aa25.07■■□□□ 1.6
SDR39U1-209ENST00000554947 PRICKLE1Q96MT3 831 aaPredicted RBP25.07■■□□□ 1.6
SDR39U1-209ENST00000554947 CNPY3Q9BT09 278 aa25.07■■□□□ 1.6
SDR39U1-209ENST00000554947 DEF6Q9H4E7 631 aa25.07■■□□□ 1.6
SDR39U1-209ENST00000554947 PRMT8Q9NR22 394 aaPredicted RBP25.07■■□□□ 1.6
SDR39U1-209ENST00000554947 FBXO4Q9UKT5 387 aa25.07■■□□□ 1.6
SDR39U1-209ENST00000554947 CACNA1HO95180 2353 aa25.07■■□□□ 1.6
SDR39U1-209ENST00000554947 TBL1XO60907 577 aa25.06■■□□□ 1.6
SDR39U1-209ENST00000554947 COL9A1P20849 921 aa25.06■■□□□ 1.6
SDR39U1-209ENST00000554947 SGSHP51688 502 aa25.06■■□□□ 1.6
SDR39U1-209ENST00000554947 E2F5Q15329 346 aa25.06■■□□□ 1.6
SDR39U1-209ENST00000554947 ARL13BQ3SXY8 428 aa25.06■■□□□ 1.6
SDR39U1-209ENST00000554947 C5orf22Q49AR2 442 aa25.06■■□□□ 1.6
SDR39U1-209ENST00000554947 RABGAP1LQ5R372 815 aa25.06■■□□□ 1.6
SDR39U1-209ENST00000554947 CCDC122Q5T0U0 273 aa25.06■■□□□ 1.6
SDR39U1-209ENST00000554947 LGI2Q8N0V4 545 aa25.06■■□□□ 1.6
SDR39U1-209ENST00000554947 FAM172AQ8WUF8 416 aa25.06■■□□□ 1.6
SDR39U1-209ENST00000554947 HS3ST4Q9Y661 456 aa25.06■■□□□ 1.6
SDR39U1-209ENST00000554947 TMEM191CA6NGB0 347 aa25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 TRIM24O15164 1050 aa25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 CHRM1P11229 460 aaPredicted RBP25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 CDC25BP30305 580 aa25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 KIR2DL1P43626 348 aaPredicted RBP25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 CXCL12P48061 93 aa25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 ATXN1P54253 815 aaKnown RBP25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 PTPN5P54829 565 aa25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 HDAC4P56524 1084 aa25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 AUHQ13825 339 aaKnown RBP25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 ANGPT1Q15389 498 aa25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 CDO1Q16878 200 aa25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 ANKS1BQ7Z6G8 1248 aa25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 PRSS33Q8NF86 280 aa25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 CCDC42Q96M95 316 aa25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 NHEJ1Q9H9Q4 299 aaPredicted RBP25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 MUC6Q6W4X9 2439 aa25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 FANCMQ8IYD8 2048 aa25.05■■□□□ 1.6
SDR39U1-209ENST00000554947 ATMINO43313 823 aaPredicted RBP25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 RPS24P62847 133 aaKnown RBP25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 EIF4HQ15056 248 aaKnown RBP25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 ZNF528Q3MIS6 628 aa25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 C10orf76Q5T2E6 689 aa25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 FBXL22Q6P050 247 aa25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 TRMT11Q7Z4G4 463 aaKnown RBP25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 KIAA0907Q7Z7F0 614 aaPredicted RBP25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 FAM131BQ86XD5 332 aa25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 DNAAF5Q86Y56 855 aa25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 CCDC117Q8IWD4 279 aaPredicted RBP25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 RPLP0P6Q8NHW5 317 aa25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 FIBINQ8TAL6 211 aa25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 WFIKKN2Q8TEU8 576 aa25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 NTAN1Q96AB6 310 aa25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 MYEOVQ96EZ4 313 aa25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 CHP1Q99653 195 aa25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 ANLNQ9NQW6 1124 aa25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 CLEC4EQ9ULY5 219 aa25.04■■□□□ 1.6
SDR39U1-209ENST00000554947 I6L893 689 aaPredicted RBP25.03■■□□□ 1.6
SDR39U1-209ENST00000554947 NPC1O15118 1278 aa25.03■■□□□ 1.6
SDR39U1-209ENST00000554947 CCP110O43303 1012 aa25.03■■□□□ 1.6
SDR39U1-209ENST00000554947 TIMM44O43615 452 aa25.03■■□□□ 1.6
SDR39U1-209ENST00000554947 AKR1B10O60218 316 aa25.03■■□□□ 1.6
SDR39U1-209ENST00000554947 CYP1A2P05177 515 aa25.03■■□□□ 1.6
SDR39U1-209ENST00000554947 AIF1P55008 147 aa25.03■■□□□ 1.6
SDR39U1-209ENST00000554947 NRG1Q02297 640 aaPredicted RBP25.03■■□□□ 1.6
SDR39U1-209ENST00000554947 GFPT1Q06210 699 aaPredicted RBP25.03■■□□□ 1.6
SDR39U1-209ENST00000554947 TCF15Q12870 199 aa25.03■■□□□ 1.6
SDR39U1-209ENST00000554947 SH3PXD2AQ5TCZ1 1133 aa25.03■■□□□ 1.6
SDR39U1-209ENST00000554947 SYT13Q7L8C5 426 aa25.03■■□□□ 1.6
SDR39U1-209ENST00000554947 MFN1Q8IWA4 741 aa25.03■■□□□ 1.6
SDR39U1-209ENST00000554947 SFTPA1Q8IWL2 248 aa25.03■■□□□ 1.6
SDR39U1-209ENST00000554947 MAML2Q8IZL2 1156 aaPredicted RBP25.03■■□□□ 1.6
SDR39U1-209ENST00000554947 PANX2Q96RD6 677 aa25.03■■□□□ 1.6
SDR39U1-209ENST00000554947 NCAPGQ9BPX3 1015 aa25.03■■□□□ 1.6
SDR39U1-209ENST00000554947 THAP2Q9H0W7 228 aa25.03■■□□□ 1.6
SDR39U1-209ENST00000554947 A0A1B0GVM2 712 aa25.02■■□□□ 1.6
SDR39U1-209ENST00000554947 TCAF2A6NFQ2 919 aa25.02■■□□□ 1.6
SDR39U1-209ENST00000554947 PRRT4C9JH25 899 aa25.02■■□□□ 1.6
SDR39U1-209ENST00000554947 LUC7L3O95232 432 aaKnown RBP25.02■■□□□ 1.6
SDR39U1-209ENST00000554947 HLA-FP30511 346 aa25.02■■□□□ 1.6
SDR39U1-209ENST00000554947 HOXA6P31267 233 aa25.02■■□□□ 1.6
SDR39U1-209ENST00000554947 ADRA1BP35368 520 aa25.02■■□□□ 1.6
SDR39U1-209ENST00000554947 SEC13P55735 322 aa25.02■■□□□ 1.6
SDR39U1-209ENST00000554947 OGDHQ02218 1023 aa25.02■■□□□ 1.6
SDR39U1-209ENST00000554947 SCAPQ12770 1279 aa25.02■■□□□ 1.6
SDR39U1-209ENST00000554947 PKN3Q6P5Z2 889 aa25.02■■□□□ 1.6
SDR39U1-209ENST00000554947 UCMAQ8WVF2 138 aa25.02■■□□□ 1.6
SDR39U1-209ENST00000554947 FAM126AQ9BYI3 521 aaPredicted RBP25.02■■□□□ 1.6
SDR39U1-209ENST00000554947 SIK2Q9H0K1 926 aa25.02■■□□□ 1.6
SDR39U1-209ENST00000554947 OSBPL2Q9H1P3 480 aa25.02■■□□□ 1.6
SDR39U1-209ENST00000554947 STIM2Q9P246 746 aa25.02■■□□□ 1.6
SDR39U1-209ENST00000554947 MYO1AQ9UBC5 1043 aa25.02■■□□□ 1.6
SDR39U1-209ENST00000554947 WDFY4Q6ZS81 3184 aa25.02■■□□□ 1.6
SDR39U1-209ENST00000554947 HNRNPLP14866 589 aaKnown RBP eCLIP25.01■■□□□ 1.59
SDR39U1-209ENST00000554947 PSMA2P25787 234 aa25.01■■□□□ 1.59
SDR39U1-209ENST00000554947 GALCP54803 685 aa25.01■■□□□ 1.59
SDR39U1-209ENST00000554947 OXCT1P55809 520 aa25.01■■□□□ 1.59
SDR39U1-209ENST00000554947 CDH18Q13634 790 aa25.01■■□□□ 1.59
SDR39U1-209ENST00000554947 ACAP1Q15027 740 aa25.01■■□□□ 1.59
SDR39U1-209ENST00000554947 GEN1Q17RS7 908 aa25.01■■□□□ 1.59
SDR39U1-209ENST00000554947 C2orf27AQ580R0 203 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms