RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 FNIP1Q8TF40 1166 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 DEPDC1BQ8WUY9 529 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 APOL2Q9BQE5 337 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 VRTNQ9H8Y1 702 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 ZC3H7BQ9UGR2 993 aaKnown RBP17.04■□□□□ 0.32
PCNX1-209ENST00000554879 BRCA1P38398 1863 aaKnown RBP17.04■□□□□ 0.32
PCNX1-209ENST00000554879 YJEFN3A6XGL0 299 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 E7ENQ6 273 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 IMPDH2P12268 514 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 USP6NLQ92738 828 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 TRIM62Q9BVG3 475 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 FTHL17Q9BXU8 183 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 UBP1Q9NZI7 540 aa17.04■□□□□ 0.32
PCNX1-209ENST00000554879 PRRC2BQ5JSZ5 2229 aaKnown RBP17.04■□□□□ 0.32
PCNX1-209ENST00000554879 CFAP69A5D8W1 941 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 RIPK2O43353 540 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 PTGIRP43119 386 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 MAGEA8P43361 318 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 CRYBG2Q8N1P7 616 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 CCDC185Q8N715 623 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 FBXO36Q8NEA4 188 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 SLC35F5Q8WV83 523 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 CDKL2Q92772 493 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 HERPUD2Q9BSE4 406 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 SFMBT1Q9UHJ3 866 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 ADAMTS4O75173 837 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 F9P00740 461 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 KRT16P08779 473 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 DMPKQ09013 629 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 SLC5A9Q2M3M2 681 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 ARHGAP17Q68EM7 881 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 ZNF280BQ86YH2 543 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 ATXN7L3BQ96GX2 97 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 YME1L1Q96TA2 773 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 PFDN4Q9NQP4 134 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 BLOC1S6Q9UL45 172 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 SCAMP3O14828 347 aaKnown RBP17.03■□□□□ 0.32
PCNX1-209ENST00000554879 BNIP3LO60238 219 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 TTC4O95801 387 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 WARSP23381 471 aaKnown RBP17.03■□□□□ 0.32
PCNX1-209ENST00000554879 TNFRSF8P28908 595 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 RPL22P35268 128 aaKnown RBP17.03■□□□□ 0.32
PCNX1-209ENST00000554879 GATMP50440 423 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 PTP4A2Q12974 167 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 CLEC20AQ6ZU45 233 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 SCAMP5Q8TAC9 235 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 UBE2OQ9C0C9 1292 aaKnown RBP17.03■□□□□ 0.32
PCNX1-209ENST00000554879 USP15Q9Y4E8 981 aaPredicted RBP17.03■□□□□ 0.32
PCNX1-209ENST00000554879 HOXA2O43364 376 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 MGEA5O60502 916 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 CIB2O75838 187 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 STAMBPO95630 424 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 HOXD8P13378 290 aaPredicted RBP17.03■□□□□ 0.32
PCNX1-209ENST00000554879 TMED10P49755 219 aaKnown RBP17.03■□□□□ 0.32
PCNX1-209ENST00000554879 GBE1Q04446 702 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 BTG3Q14201 252 aaPredicted RBP17.03■□□□□ 0.32
PCNX1-209ENST00000554879 SLC26A9Q7LBE3 791 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 TFAP2DQ7Z6R9 452 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 WDR75Q8IWA0 830 aaKnown RBP17.03■□□□□ 0.32
PCNX1-209ENST00000554879 MAGEC3Q8TD91 643 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 RSPH1Q8WYR4 309 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 NRDE2Q9H7Z3 1164 aa17.03■□□□□ 0.32
PCNX1-209ENST00000554879 SOAT2O75908 522 aa17.02■□□□□ 0.32
PCNX1-209ENST00000554879 TFE3P19532 575 aaPredicted RBP17.02■□□□□ 0.32
PCNX1-209ENST00000554879 SSTR1P30872 391 aa17.02■□□□□ 0.32
PCNX1-209ENST00000554879 SYPL2Q5VXT5 272 aa17.02■□□□□ 0.32
PCNX1-209ENST00000554879 HFE2Q6ZVN8 426 aa17.02■□□□□ 0.32
PCNX1-209ENST00000554879 ALLCQ8N6M5 410 aa17.02■□□□□ 0.32
PCNX1-209ENST00000554879 LGMNQ99538 433 aa17.02■□□□□ 0.32
PCNX1-209ENST00000554879 TMBIM4Q9HC24 238 aa17.02■□□□□ 0.32
PCNX1-209ENST00000554879 TMPRSS4Q9NRS4 437 aa17.02■□□□□ 0.32
PCNX1-209ENST00000554879 GDAP2Q9NXN4 497 aa17.02■□□□□ 0.32
PCNX1-209ENST00000554879 NR2E3Q9Y5X4 410 aa17.02■□□□□ 0.32
PCNX1-209ENST00000554879 COMMD10Q9Y6G5 202 aa17.02■□□□□ 0.32
PCNX1-209ENST00000554879 TARSP26639 723 aaKnown RBP17.02■□□□□ 0.32
PCNX1-209ENST00000554879 MAGEA10P43363 369 aaPredicted RBP17.02■□□□□ 0.32
PCNX1-209ENST00000554879 TLE2Q04725 743 aa17.02■□□□□ 0.32
PCNX1-209ENST00000554879 STAT4Q14765 748 aa17.02■□□□□ 0.32
PCNX1-209ENST00000554879 VEPH1Q14D04 833 aa17.02■□□□□ 0.32
PCNX1-209ENST00000554879 CHSY1Q86X52 802 aa17.02■□□□□ 0.32
PCNX1-209ENST00000554879 ATPAF2Q8N5M1 289 aa17.02■□□□□ 0.32
PCNX1-209ENST00000554879 LOXHD1Q8IVV2 1947 aa17.02■□□□□ 0.32
PCNX1-209ENST00000554879 SLC12A8A0AV02 714 aa17.02■□□□□ 0.31
PCNX1-209ENST00000554879 CDH16O75309 829 aa17.02■□□□□ 0.31
PCNX1-209ENST00000554879 BEST1O76090 585 aa17.02■□□□□ 0.31
PCNX1-209ENST00000554879 MORF4L2Q15014 288 aa17.02■□□□□ 0.31
PCNX1-209ENST00000554879 CCNJLQ8IV13 435 aa17.02■□□□□ 0.31
PCNX1-209ENST00000554879 HIPK4Q8NE63 616 aa17.02■□□□□ 0.31
PCNX1-209ENST00000554879 KBTBD7Q8WVZ9 684 aa17.02■□□□□ 0.31
PCNX1-209ENST00000554879 SLC4A5Q9BY07 1137 aa17.02■□□□□ 0.31
PCNX1-209ENST00000554879 CYP4F11Q9HBI6 524 aa17.02■□□□□ 0.31
PCNX1-209ENST00000554879 F8W810 466 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 MSI1O43347 362 aaKnown RBP17.01■□□□□ 0.31
PCNX1-209ENST00000554879 IFI35P80217 286 aaPredicted RBP17.01■□□□□ 0.31
PCNX1-209ENST00000554879 SFSWAPQ12872 951 aaKnown RBP17.01■□□□□ 0.31
PCNX1-209ENST00000554879 CBX3Q13185 183 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 IRF5Q13568 498 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 IKBKEQ14164 716 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 TLDC1Q6P9B6 456 aa17.01■□□□□ 0.31
PCNX1-209ENST00000554879 GLIS1Q8NBF1 620 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms