RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, human

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-215	ENST00000554567		O00370	1275 aa		27.6	■■■□□ 2.01
KTN1-215	ENST00000554567	SETSIP	P0DME0	302 aa		27.6	■■■□□ 2.01
KTN1-215	ENST00000554567	PRCP	P42785	496 aa		27.6	■■■□□ 2.01
KTN1-215	ENST00000554567	ZBTB16	Q05516	673 aa		27.6	■■■□□ 2.01
KTN1-215	ENST00000554567	PNOC	Q13519	176 aa		27.6	■■■□□ 2.01
KTN1-215	ENST00000554567	TTC31	Q49AM3	519 aa	Predicted RBP	27.6	■■■□□ 2.01
KTN1-215	ENST00000554567	ADAT2	Q7Z6V5	191 aa	Known RBP	27.6	■■■□□ 2.01
KTN1-215	ENST00000554567	HNRNPLL	Q8WVV9	542 aa	Known RBP	27.6	■■■□□ 2.01
KTN1-215	ENST00000554567	TSG101	Q99816	390 aa		27.6	■■■□□ 2.01
KTN1-215	ENST00000554567	FBRS	Q9HAH7	460 aa		27.6	■■■□□ 2.01
KTN1-215	ENST00000554567	TMEM131	Q92545	1883 aa		27.59	■■■□□ 2.01
KTN1-215	ENST00000554567	FAM47DP	A6NHR8	397 aa		27.59	■■■□□ 2.01
KTN1-215	ENST00000554567	CD27	P26842	260 aa		27.59	■■■□□ 2.01
KTN1-215	ENST00000554567	GRIA4	P48058	902 aa		27.59	■■■□□ 2.01
KTN1-215	ENST00000554567	SLC11A2	P49281	568 aa		27.59	■■■□□ 2.01
KTN1-215	ENST00000554567	IL9R	Q01113	521 aa		27.59	■■■□□ 2.01
KTN1-215	ENST00000554567	KCNT1	Q5JUK3	1230 aa		27.59	■■■□□ 2.01
KTN1-215	ENST00000554567	PIK3R6	Q5UE93	754 aa		27.59	■■■□□ 2.01
KTN1-215	ENST00000554567	ZNF776	Q68DI1	518 aa	Predicted RBP	27.59	■■■□□ 2.01
KTN1-215	ENST00000554567	SCAND2P	Q9GZW5	306 aa	Predicted RBP	27.59	■■■□□ 2.01
KTN1-215	ENST00000554567	SGK2	Q9HBY8	427 aa		27.59	■■■□□ 2.01
KTN1-215	ENST00000554567	KIAA1257	Q9ULG3	409 aa		27.59	■■■□□ 2.01
KTN1-215	ENST00000554567		H0Y8X5	98 aa		27.58	■■■□□ 2.01
KTN1-215	ENST00000554567	GABBR2	O75899	941 aa		27.58	■■■□□ 2.01
KTN1-215	ENST00000554567	SLC6A4	P31645	630 aa		27.58	■■■□□ 2.01
KTN1-215	ENST00000554567	ANKRD40	Q6AI12	368 aa		27.58	■■■□□ 2.01
KTN1-215	ENST00000554567	PMF1	Q6P1K2	205 aa		27.58	■■■□□ 2.01
KTN1-215	ENST00000554567	TMEM270	Q6UE05	265 aa		27.58	■■■□□ 2.01
KTN1-215	ENST00000554567	PDZD3	Q86UT5	571 aa		27.58	■■■□□ 2.01
KTN1-215	ENST00000554567	UNC45B	Q8IWX7	931 aa		27.58	■■■□□ 2.01
KTN1-215	ENST00000554567	TFAP2B	Q92481	460 aa		27.58	■■■□□ 2.01
KTN1-215	ENST00000554567	IGSF8	Q969P0	613 aa		27.58	■■■□□ 2.01
KTN1-215	ENST00000554567	CCDC34	Q96HJ3	373 aa		27.58	■■■□□ 2.01
KTN1-215	ENST00000554567	GDPD2	Q9HCC8	539 aa		27.58	■■■□□ 2.01
KTN1-215	ENST00000554567	OSGEP	Q9NPF4	335 aa		27.58	■■■□□ 2.01
KTN1-215	ENST00000554567	NCKAP1	Q9Y2A7	1128 aa		27.58	■■■□□ 2.01
KTN1-215	ENST00000554567	MUC22	E2RYF6	1773 aa	Predicted RBP	27.58	■■■□□ 2
KTN1-215	ENST00000554567	CABIN1	Q9Y6J0	2220 aa		27.57	■■■□□ 2
KTN1-215	ENST00000554567	FAM149A	A5PLN7	773 aa		27.57	■■■□□ 2
KTN1-215	ENST00000554567	SLC16A3	O15427	465 aa	Known RBP	27.57	■■■□□ 2
KTN1-215	ENST00000554567	ACSL4	O60488	711 aa		27.57	■■■□□ 2
KTN1-215	ENST00000554567	TBX4	P57082	545 aa		27.57	■■■□□ 2
KTN1-215	ENST00000554567	FKBP3	Q00688	224 aa	Known RBP	27.57	■■■□□ 2
KTN1-215	ENST00000554567	PKDCC	Q504Y2	493 aa		27.57	■■■□□ 2
KTN1-215	ENST00000554567	MPP7	Q5T2T1	576 aa		27.57	■■■□□ 2
KTN1-215	ENST00000554567	MSANTD2	Q6P1R3	559 aa		27.57	■■■□□ 2
KTN1-215	ENST00000554567	LCLAT1	Q6UWP7	414 aa		27.57	■■■□□ 2
KTN1-215	ENST00000554567	MFN1	Q8IWA4	741 aa		27.57	■■■□□ 2
KTN1-215	ENST00000554567	GOLGA1	Q92805	767 aa		27.57	■■■□□ 2
KTN1-215	ENST00000554567	GTF3C3	Q9Y5Q9	886 aa		27.57	■■■□□ 2
KTN1-215	ENST00000554567	ITPR1	Q14643	2758 aa		27.56	■■■□□ 2
KTN1-215	ENST00000554567	TNFSF14	O43557	240 aa		27.56	■■■□□ 2
KTN1-215	ENST00000554567	TBXAS1	P24557	533 aa	Predicted RBP	27.56	■■■□□ 2
KTN1-215	ENST00000554567	GRK6	P43250	576 aa		27.56	■■■□□ 2
KTN1-215	ENST00000554567	CCT8	P50990	548 aa		27.56	■■■□□ 2
KTN1-215	ENST00000554567	PMS1	P54277	932 aa	Known RBP	27.56	■■■□□ 2
KTN1-215	ENST00000554567	ST8SIA6	P61647	398 aa		27.56	■■■□□ 2
KTN1-215	ENST00000554567	FAM133B	Q5BKY9	247 aa	Known RBP	27.56	■■■□□ 2
KTN1-215	ENST00000554567	NUGGC	Q68CJ6	796 aa		27.56	■■■□□ 2
KTN1-215	ENST00000554567	SCML4	Q8N228	414 aa		27.56	■■■□□ 2
KTN1-215	ENST00000554567	GALNT15	Q8N3T1	639 aa		27.56	■■■□□ 2
KTN1-215	ENST00000554567	UBR7	Q8N806	425 aa		27.56	■■■□□ 2
KTN1-215	ENST00000554567	CLEC4C	Q8WTT0	213 aa		27.56	■■■□□ 2
KTN1-215	ENST00000554567	SLC35F5	Q8WV83	523 aa		27.56	■■■□□ 2
KTN1-215	ENST00000554567	RMND1	Q9NWS8	449 aa		27.56	■■■□□ 2
KTN1-215	ENST00000554567	FBXL12	Q9NXK8	326 aa		27.56	■■■□□ 2
KTN1-215	ENST00000554567	ARMCX3	Q9UH62	379 aa	Predicted RBP	27.56	■■■□□ 2
KTN1-215	ENST00000554567	PCDHB4	Q9Y5E5	795 aa		27.56	■■■□□ 2
KTN1-215	ENST00000554567	FASN	P49327	2511 aa	Known RBP	27.55	■■■□□ 2
KTN1-215	ENST00000554567	TRABD2B	A6NFA1	517 aa		27.55	■■■□□ 2
KTN1-215	ENST00000554567		M0QYV0	167 aa		27.55	■■■□□ 2
KTN1-215	ENST00000554567	DKK1	O94907	266 aa		27.55	■■■□□ 2
KTN1-215	ENST00000554567	CALCA	P01258	141 aa		27.55	■■■□□ 2
KTN1-215	ENST00000554567	IGLV3-27	P01718	113 aa		27.55	■■■□□ 2
KTN1-215	ENST00000554567	LTF	P02788	710 aa		27.55	■■■□□ 2
KTN1-215	ENST00000554567	C21orf59	P57076	290 aa		27.55	■■■□□ 2
KTN1-215	ENST00000554567	CYP4F3	Q08477	520 aa		27.55	■■■□□ 2
KTN1-215	ENST00000554567	KIAA0895L	Q68EN5	471 aa		27.55	■■■□□ 2
KTN1-215	ENST00000554567	DHX40	Q8IX18	779 aa	Known RBP	27.55	■■■□□ 2
KTN1-215	ENST00000554567	CARNMT1	Q8N4J0	409 aa		27.55	■■■□□ 2
KTN1-215	ENST00000554567	RSPH9	Q9H1X1	276 aa	Predicted RBP	27.55	■■■□□ 2
KTN1-215	ENST00000554567	PABPC3	Q9H361	631 aa	Known RBP	27.55	■■■□□ 2
KTN1-215	ENST00000554567	TRIM49B	A6NDI0	452 aa		27.54	■■■□□ 2
KTN1-215	ENST00000554567	IRAK2	O43187	625 aa		27.54	■■■□□ 2
KTN1-215	ENST00000554567	SIN3B	O75182	1162 aa		27.54	■■■□□ 2
KTN1-215	ENST00000554567	C7	P10643	843 aa		27.54	■■■□□ 2
KTN1-215	ENST00000554567	CTSK	P43235	329 aa		27.54	■■■□□ 2
KTN1-215	ENST00000554567	PRAMEF14	Q5SWL7	426 aa		27.54	■■■□□ 2
KTN1-215	ENST00000554567	ZNF658	Q5TYW1	1059 aa	Predicted RBP	27.54	■■■□□ 2
KTN1-215	ENST00000554567	NADSYN1	Q6IA69	706 aa		27.54	■■■□□ 2
KTN1-215	ENST00000554567	HJURP	Q8NCD3	748 aa	Predicted RBP	27.54	■■■□□ 2
KTN1-215	ENST00000554567	FIBIN	Q8TAL6	211 aa		27.54	■■■□□ 2
KTN1-215	ENST00000554567	IRGQ	Q8WZA9	623 aa		27.54	■■■□□ 2
KTN1-215	ENST00000554567	SLC35C1	Q96A29	364 aa		27.54	■■■□□ 2
KTN1-215	ENST00000554567	ACE2	Q9BYF1	805 aa	Predicted RBP	27.54	■■■□□ 2
KTN1-215	ENST00000554567	MIS12	Q9H081	205 aa		27.54	■■■□□ 2
KTN1-215	ENST00000554567	RNF225	M0QZC1	329 aa	Predicted RBP	27.53	■■■□□ 2
KTN1-215	ENST00000554567	PCDHGA12	O60330	932 aa		27.53	■■■□□ 2
KTN1-215	ENST00000554567	RNASEH1	O60930	286 aa	Known RBP	27.53	■■■□□ 2
KTN1-215	ENST00000554567	IGHV4-34	P06331	123 aa		27.53	■■■□□ 2

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms