RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 KCNK1O00180 336 aa12.05□□□□□ -0.48
SHMT2-212ENST00000554467 MSI1O43347 362 aaKnown RBP12.05□□□□□ -0.48
SHMT2-212ENST00000554467 PYGBP11216 843 aa12.05□□□□□ -0.48
SHMT2-212ENST00000554467 ATP2A2P16615 1042 aaKnown RBP12.05□□□□□ -0.48
SHMT2-212ENST00000554467 KRT15P19012 456 aa12.05□□□□□ -0.48
SHMT2-212ENST00000554467 GNAZP19086 355 aa12.05□□□□□ -0.48
SHMT2-212ENST00000554467 NUMBP49757 651 aa12.05□□□□□ -0.48
SHMT2-212ENST00000554467 YWHAGP61981 247 aaKnown RBP eCLIP12.05□□□□□ -0.48
SHMT2-212ENST00000554467 KCNJ11Q14654 390 aa12.05□□□□□ -0.48
SHMT2-212ENST00000554467 STAT4Q14765 748 aa12.05□□□□□ -0.48
SHMT2-212ENST00000554467 TNFAIP8L3Q5GJ75 292 aa12.05□□□□□ -0.48
SHMT2-212ENST00000554467 SLC24A5Q71RS6 500 aa12.05□□□□□ -0.48
SHMT2-212ENST00000554467 PCGF5Q86SE9 256 aa12.05□□□□□ -0.48
SHMT2-212ENST00000554467 TRIM74Q86UV6 250 aa12.05□□□□□ -0.48
SHMT2-212ENST00000554467 TRIM73Q86UV7 250 aa12.05□□□□□ -0.48
SHMT2-212ENST00000554467 DBF4BQ8NFT6 615 aa12.05□□□□□ -0.48
SHMT2-212ENST00000554467 WDR6Q9NNW5 1121 aaKnown RBP12.05□□□□□ -0.48
SHMT2-212ENST00000554467 ARHGEF3Q9NR81 526 aa12.05□□□□□ -0.48
SHMT2-212ENST00000554467 TBC1D13Q9NVG8 400 aa12.05□□□□□ -0.48
SHMT2-212ENST00000554467 TRIM17Q9Y577 477 aa12.05□□□□□ -0.48
SHMT2-212ENST00000554467 A0A1W2PPM1 405 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 KBTBD13C9JR72 458 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 GOLGA8RI6L899 631 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 EEF2KO00418 725 aaKnown RBP12.04□□□□□ -0.48
SHMT2-212ENST00000554467 PQBP1O60828 265 aaKnown RBP12.04□□□□□ -0.48
SHMT2-212ENST00000554467 CDH16O75309 829 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 CRADDP78560 199 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 YWHAHQ04917 246 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-212ENST00000554467 TAF11Q15544 211 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 TCTN1Q2MV58 587 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 EFHC2Q5JST6 749 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 ASRGL1Q7L266 308 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 TAOK1Q7L7X3 1001 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 TTC9BQ8N6N2 239 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 NT5C3BQ969T7 300 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 SCLYQ96I15 445 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 ACBD6Q9BR61 282 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 SIK2Q9H0K1 926 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 C12orf65Q9H3J6 166 aaKnown RBP12.04□□□□□ -0.48
SHMT2-212ENST00000554467 RGS18Q9NS28 235 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 PCMTD2Q9NV79 361 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 PDE4DIPQ5VU43 2346 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 CDH23Q9H251 3354 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 NBNO60934 754 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 CABYRO75952 493 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 ADRA1BP35368 520 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 SCNN1AP37088 669 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 MTFR1Q15390 333 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 DDR2Q16832 855 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 SLC45A4Q5BKX6 768 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 NOMO2Q5JPE7 1267 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 FAM26DQ5JW98 314 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 HEATR6Q6AI08 1181 aaKnown RBP12.04□□□□□ -0.48
SHMT2-212ENST00000554467 TAC4Q86UU9 113 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 UNC93B1Q9H1C4 597 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 CNGB3Q9NQW8 809 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 SFMBT1Q9UHJ3 866 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 OAS1P00973 400 aaKnown RBP12.04□□□□□ -0.48
SHMT2-212ENST00000554467 SRGAP2BP0DMP2 458 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 MSH2P43246 934 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 RAB41Q5JT25 222 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 FAM171BQ6P995 826 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 DCLRE1AQ6PJP8 1040 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 ARCQ7LC44 396 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 SPATA2LQ8IUW3 424 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-212ENST00000554467 RELL1Q8IUW5 271 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 MPP5Q8N3R9 675 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 B4GALNT2Q8NHY0 566 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 UTP4Q969X6 686 aaKnown RBP12.04□□□□□ -0.48
SHMT2-212ENST00000554467 TKTL2Q9H0I9 626 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 STMN4Q9H169 189 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-212ENST00000554467 DMAP1Q9NPF5 467 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-212ENST00000554467 PAK5Q9P286 719 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 RABGEF1Q9UJ41 708 aa12.04□□□□□ -0.48
SHMT2-212ENST00000554467 MAGED2Q9UNF1 606 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-212ENST00000554467 MOXD2PA6NHM9 499 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 M0QZQ0 153 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 FAM155BO75949 473 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 TSPY1Q01534 308 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 FOXB2Q5VYV0 432 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 RFX8Q6ZV50 586 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 LRRC8DQ7L1W4 858 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 PRPF39Q86UA1 669 aaKnown RBP12.03□□□□□ -0.48
SHMT2-212ENST00000554467 KLHL23Q8NBE8 558 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 CELF6Q96J87 481 aaKnown RBP12.03□□□□□ -0.48
SHMT2-212ENST00000554467 PRDM12Q9H4Q4 367 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 LRRC42Q9Y546 428 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 BCLAF3A2AJT9 711 aaKnown RBP12.03□□□□□ -0.48
SHMT2-212ENST00000554467 SMAPO00193 183 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 STX2P32856 288 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 CCL23P55773 120 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 BNIP1Q12981 228 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 SPARCL1Q14515 664 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 GPNMBQ14956 572 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 RNF220Q5VTB9 566 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 ARHGEF18Q6ZSZ5 1173 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 CDKL3Q8IVW4 592 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-212ENST00000554467 THEM5Q8N1Q8 247 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 NPWQ8N729 165 aa12.03□□□□□ -0.48
SHMT2-212ENST00000554467 ATP11CQ8NB49 1132 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms