RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 TRIM72Q6ZMU5 477 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 KBTBD6Q86V97 674 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 CHSY1Q86X52 802 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 DRC7Q8IY82 874 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 KIAA2013Q8IYS2 634 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 ATP6V0D2Q8N8Y2 350 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 SLC20A1Q8WUM9 679 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 CIPCQ9C0C6 399 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 NUCKS1Q9H1E3 243 aaKnown RBP13.54□□□□□ -0.24
SHMT2-211ENST00000554310 CD248Q9HCU0 757 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 TMEM51Q9NW97 253 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 CACNA2D2Q9NY47 1150 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 SLC12A6Q9UHW9 1150 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 GGA2Q9UJY4 613 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 STAP1Q9ULZ2 295 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 STON1Q9Y6Q2 735 aa13.54□□□□□ -0.24
SHMT2-211ENST00000554310 GOLGA6L7A0A1B0GV03 622 aa13.53□□□□□ -0.24
SHMT2-211ENST00000554310 KCNU1A8MYU2 1149 aa13.53□□□□□ -0.24
SHMT2-211ENST00000554310 FOXD2O60548 495 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-211ENST00000554310 RHOBTB1O94844 696 aa13.53□□□□□ -0.24
SHMT2-211ENST00000554310 CYP1A1P04798 512 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-211ENST00000554310 ABCB4P21439 1286 aa13.53□□□□□ -0.24
SHMT2-211ENST00000554310 P2RY2P41231 377 aa13.53□□□□□ -0.24
SHMT2-211ENST00000554310 FMO1Q01740 532 aa13.53□□□□□ -0.24
SHMT2-211ENST00000554310 ARID5AQ03989 594 aa13.53□□□□□ -0.24
SHMT2-211ENST00000554310 CDH18Q13634 790 aa13.53□□□□□ -0.24
SHMT2-211ENST00000554310 BYSLQ13895 437 aaKnown RBP13.53□□□□□ -0.24
SHMT2-211ENST00000554310 FAM102AQ5T9C2 384 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-211ENST00000554310 TTC39BQ5VTQ0 682 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-211ENST00000554310 NAA35Q5VZE5 725 aa13.53□□□□□ -0.24
SHMT2-211ENST00000554310 XYLT1Q86Y38 959 aa13.53□□□□□ -0.24
SHMT2-211ENST00000554310 MFN1Q8IWA4 741 aa13.53□□□□□ -0.24
SHMT2-211ENST00000554310 CCDC117Q8IWD4 279 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-211ENST00000554310 DUSP15Q9H1R2 295 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-211ENST00000554310 ABCB8Q9NUT2 735 aa13.53□□□□□ -0.24
SHMT2-211ENST00000554310 CALCOCO1Q9P1Z2 691 aa13.53□□□□□ -0.24
SHMT2-211ENST00000554310 PAXBP1Q9Y5B6 917 aa13.53□□□□□ -0.24
SHMT2-211ENST00000554310 PCDHGA5Q9Y5G8 931 aa13.53□□□□□ -0.24
SHMT2-211ENST00000554310 SYNJ2BP-COX16A0A087WUM0 186 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 F5H5T6 163 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 DCLK1O15075 740 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 GABRG2P18507 467 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 TACR2P21452 398 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 IL12RB1P42701 662 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 RPS24P62847 133 aaKnown RBP13.52□□□□□ -0.25
SHMT2-211ENST00000554310 SPEM2Q0P670 501 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 NME3Q13232 169 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 ZNF234Q14588 700 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 FILIP1LQ4L180 1135 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 OTUD1Q5VV17 481 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-211ENST00000554310 RAP1GAP2Q684P5 730 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 PMS2CLQ68D20 193 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 TMEM215Q68D42 235 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 KIAA1211LQ6NV74 962 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 CHST9Q7L1S5 443 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 ARCQ7LC44 396 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 KIAA0907Q7Z7F0 614 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-211ENST00000554310 ADIPOR2Q86V24 386 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 PGBD3Q8N328 593 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 FIBINQ8TAL6 211 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 RNF34Q969K3 372 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 NPY6RQ99463 290 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 KCNF1Q9H3M0 494 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 PARD6AQ9NPB6 346 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.52□□□□□ -0.25
SHMT2-211ENST00000554310 COX16Q9P0S2 106 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 IMPACTQ9P2X3 320 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 XPO7Q9UIA9 1087 aaKnown RBP13.52□□□□□ -0.25
SHMT2-211ENST00000554310 MYO6Q9UM54 1294 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 USP18Q9UMW8 372 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 RAD54BQ9Y620 910 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 THADAQ6YHU6 1953 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 ABCA7Q8IZY2 2146 aa13.52□□□□□ -0.25
SHMT2-211ENST00000554310 NUP205Q92621 2012 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 TNRC6BQ9UPQ9 1833 aaKnown RBP13.51□□□□□ -0.25
SHMT2-211ENST00000554310 A0A1W2PQC6 194 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 M0QYT0 321 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 CBFA2T2O43439 604 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 ZNF217O75362 1048 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 LUC7L3O95232 432 aaKnown RBP13.51□□□□□ -0.25
SHMT2-211ENST00000554310 F9P00740 461 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 CCDC172P0C7W6 258 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 CHRNB2P17787 502 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 NDUFV2P19404 249 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 TGM1P22735 817 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 MMP8P22894 467 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 CD70P32970 193 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 SULT1E1P49888 294 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 CENPCQ03188 943 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 CSRP2Q16527 193 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 MAP7D1Q3KQU3 841 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 SLC25A52Q3SY17 297 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 BRMS1LQ5PSV4 323 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 RABGAP1LQ5R372 815 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 MBLAC2Q68D91 279 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 SERPINA13PQ6UXR4 307 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 MMS22LQ6ZRQ5 1243 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 SND1Q7KZF4 910 aaKnown RBP eCLIP13.51□□□□□ -0.25
SHMT2-211ENST00000554310 LGI2Q8N0V4 545 aa13.51□□□□□ -0.25
SHMT2-211ENST00000554310 WFDC5Q8TCV5 224 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms