RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 SCLT1Q96NL6 688 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 AIFM3Q96NN9 605 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 HIST1H2AAQ96QV6 131 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 ACO2Q99798 780 aaKnown RBP2.7□□□□□ -1.98
SRP54-204ENST00000553923 ELAC2Q9BQ52 826 aaKnown RBP2.7□□□□□ -1.98
SRP54-204ENST00000553923 SENP7Q9BQF6 1050 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 SARGQ9BW04 601 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 CDCP1Q9H5V8 836 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 C6orf106Q9H6K1 298 aaPredicted RBP2.7□□□□□ -1.98
SRP54-204ENST00000553923 ABHD10Q9NUJ1 306 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 MAP3K20Q9NYL2 800 aaKnown RBP2.7□□□□□ -1.98
SRP54-204ENST00000553923 SWAP70Q9UH65 585 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 CAPN11Q9UMQ6 739 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 LZTS1Q9Y250 596 aa2.7□□□□□ -1.98
SRP54-204ENST00000553923 SPATA31A5Q5VU36 1347 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 SPATA31A7Q8IWB4 1347 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 PMM2O15305 246 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 RFPL1O75677 317 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 HSP90AA1P07900 732 aaKnown RBP2.69□□□□□ -1.98
SRP54-204ENST00000553923 TMEM225BP0DP42 221 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 PKMP14618 531 aaKnown RBP2.69□□□□□ -1.98
SRP54-204ENST00000553923 BDNFP23560 247 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 SERPINB3P29508 390 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 SLC7A1P30825 629 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 DDR1Q08345 913 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 Q0VFX4 171 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 BIRC3Q13489 604 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 SAFBQ15424 915 aaKnown RBP eCLIP2.69□□□□□ -1.98
SRP54-204ENST00000553923 CNGA3Q16281 694 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 LONRF1Q17RB8 773 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 MRGPRG-AS1Q2M3A8 158 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 ANO6Q4KMQ2 910 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 AASDHQ4L235 1098 aaPredicted RBP2.69□□□□□ -1.98
SRP54-204ENST00000553923 FAM76BQ5HYJ3 339 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 FAM83BQ5T0W9 1011 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 OTUD3Q5T2D3 398 aaPredicted RBP2.69□□□□□ -1.98
SRP54-204ENST00000553923 CCDC70Q6NSX1 233 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 ERAP2Q6P179 960 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 KRBA2Q6ZNG9 492 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 UEVLDQ8IX04 471 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 PDILTQ8N807 584 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 GPATCH11Q8N954 259 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 ZBTB34Q8NCN2 500 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 SLC35G2Q8TBE7 412 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 LPAR1Q92633 364 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 TAF15Q92804 592 aaKnown RBP eCLIP2.69□□□□□ -1.98
SRP54-204ENST00000553923 NMD3Q96D46 503 aaKnown RBP2.69□□□□□ -1.98
SRP54-204ENST00000553923 TNIP3Q96KP6 325 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 TAAR9Q96RI9 348 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 STRBPQ96SI9 672 aaKnown RBP2.69□□□□□ -1.98
SRP54-204ENST00000553923 TTLL2Q9BWV7 592 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 RNF26Q9BY78 433 aaPredicted RBP2.69□□□□□ -1.98
SRP54-204ENST00000553923 AS3MTQ9HBK9 375 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 PLCB1Q9NQ66 1216 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 SIRT3Q9NTG7 399 aaPredicted RBP2.69□□□□□ -1.98
SRP54-204ENST00000553923 LUZP4Q9P127 313 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 DDX20Q9UHI6 824 aaKnown RBP2.69□□□□□ -1.98
SRP54-204ENST00000553923 MYO6Q9UM54 1294 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 MORC2Q9Y6X9 1032 aaPredicted RBP2.69□□□□□ -1.98
SRP54-204ENST00000553923 CKAP5Q14008 2032 aa2.69□□□□□ -1.98
SRP54-204ENST00000553923 DYTNA2CJ06 578 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 SRRM3A6NNA2 597 aaPredicted RBP2.68□□□□□ -1.98
SRP54-204ENST00000553923 F5H423 210 aaPredicted RBP2.68□□□□□ -1.98
SRP54-204ENST00000553923 LDB3O75112 727 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 WDR47O94967 919 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 IL1R1P14778 569 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 BTF3P20290 206 aaKnown RBP2.68□□□□□ -1.98
SRP54-204ENST00000553923 DUSP1P28562 367 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 HALP42357 657 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 CPT1AP50416 773 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 PDLIM4P50479 330 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 CRYZQ08257 329 aaKnown RBP2.68□□□□□ -1.98
SRP54-204ENST00000553923 TRIM14Q14142 442 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 KCNJ12Q14500 433 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 ACOX1Q15067 660 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 SHBQ15464 509 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 ALFQ53S48 1182 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 C6orf10Q5SRN2 563 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 MANEALQ5VSG8 457 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.68□□□□□ -1.98
SRP54-204ENST00000553923 FAM83HQ6ZRV2 1179 aaPredicted RBP2.68□□□□□ -1.98
SRP54-204ENST00000553923 SRLQ86TD4 932 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 TRIM63Q969Q1 353 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 TTC17Q96AE7 1141 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 SUCLG2Q96I99 432 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 ZNF845Q96IR2 970 aaPredicted RBP2.68□□□□□ -1.98
SRP54-204ENST00000553923 PAGR1Q9BTK6 254 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 B3GNT5Q9BYG0 378 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 FAM83DQ9H4H8 585 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 ASNSD1Q9NWL6 643 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 HIF1ANQ9NWT6 349 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 CPNE7Q9UBL6 633 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 DNAJB11Q9UBS4 358 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 PLEKHB1Q9UF11 243 aaPredicted RBP2.68□□□□□ -1.98
SRP54-204ENST00000553923 PHTF1Q9UMS5 762 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 DTX4Q9Y2E6 619 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 PCDHGB1Q9Y5G3 927 aa2.68□□□□□ -1.98
SRP54-204ENST00000553923 ANO9A1A5B4 782 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 AQP7P3A6NL99 342 aa2.67□□□□□ -1.98
SRP54-204ENST00000553923 SMTNL1A8MU46 457 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms