RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 DCAF6Q58WW2 860 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 FAM102AQ5T9C2 384 aaPredicted RBP8.67□□□□□ -1.02
PSEN1-209ENST00000553855 SFMBT2Q5VUG0 894 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 NAA35Q5VZE5 725 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 SDE2Q6IQ49 451 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 MSANTD2Q6P1R3 559 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 TXNDC11Q6PKC3 985 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 TRMT11Q7Z4G4 463 aaKnown RBP8.67□□□□□ -1.02
PSEN1-209ENST00000553855 NOP9Q86U38 636 aaKnown RBP8.67□□□□□ -1.02
PSEN1-209ENST00000553855 VPS36Q86VN1 386 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 ETFBKMTQ8IXQ9 262 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 DEFB106AQ8N104 65 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 NAT16Q8N8M0 369 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 PRSS33Q8NF86 280 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 DQX1Q8TE96 717 aaKnown RBP8.67□□□□□ -1.02
PSEN1-209ENST00000553855 CLEC4CQ8WTT0 213 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 UCMAQ8WVF2 138 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 ATRIPQ8WXE1 791 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 ITPKCQ96DU7 683 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 CHFRQ96EP1 664 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 CPXM1Q96SM3 734 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 ANP32EQ9BTT0 268 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 FAM126AQ9BYI3 521 aaPredicted RBP8.67□□□□□ -1.02
PSEN1-209ENST00000553855 RBM12Q9NTZ6 932 aaKnown RBP8.67□□□□□ -1.02
PSEN1-209ENST00000553855 DNAJC17Q9NVM6 304 aaKnown RBP8.67□□□□□ -1.02
PSEN1-209ENST00000553855 TJP2Q9UDY2 1190 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 AGO1Q9UL18 857 aaKnown RBP8.67□□□□□ -1.02
PSEN1-209ENST00000553855 NAALADL1Q9UQQ1 740 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 TLR6Q9Y2C9 796 aa8.67□□□□□ -1.02
PSEN1-209ENST00000553855 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.67□□□□□ -1.02
PSEN1-209ENST00000553855 SYNJ2BP-COX16A0A087WUM0 186 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 OTOL1A6NHN0 477 aaPredicted RBP8.66□□□□□ -1.02
PSEN1-209ENST00000553855 GOLGA8SH3BPF8 625 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 EPHB6O15197 1021 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 IRAK2O43187 625 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 MSI1O43347 362 aaKnown RBP8.66□□□□□ -1.02
PSEN1-209ENST00000553855 ACSL4O60488 711 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 TULP3O75386 442 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 KAT7O95251 611 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 ZIC2O95409 532 aaPredicted RBP8.66□□□□□ -1.02
PSEN1-209ENST00000553855 MOCS2O96007 188 aaPredicted RBP8.66□□□□□ -1.02
PSEN1-209ENST00000553855 F9P00740 461 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 EGFP01133 1207 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 CALB1P05937 261 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 CCR1P32246 355 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 CDH5P33151 784 aaPredicted RBP8.66□□□□□ -1.02
PSEN1-209ENST00000553855 TNFRSF4P43489 277 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 DGKGP49619 791 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 RNASE9P60153 205 aaKnown RBP8.66□□□□□ -1.02
PSEN1-209ENST00000553855 MRPS21P82921 87 aaKnown RBP8.66□□□□□ -1.02
PSEN1-209ENST00000553855 KDSRQ06136 332 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 MTAPQ13126 283 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 CCINQ13939 588 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 ADGRF1Q5T601 910 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 FSTL4Q6MZW2 842 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 DPY19L2P1Q6NXN4 242 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 FAM183BPQ6ZVS7 135 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 SLC26A9Q7LBE3 791 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 BHLHA9Q7RTU4 235 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 TMEM25Q86YD3 366 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 CPXM2Q8N436 756 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 WDTC1Q8N5D0 677 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 CPA5Q8WXQ8 436 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 BHMTQ93088 406 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 TMA16Q96EY4 203 aaKnown RBP8.66□□□□□ -1.02
PSEN1-209ENST00000553855 NAP1L5Q96NT1 182 aaPredicted RBP8.66□□□□□ -1.02
PSEN1-209ENST00000553855 AGPAT1Q99943 283 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 PHACTR1Q9C0D0 580 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 HSD3B7Q9H2F3 369 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.66□□□□□ -1.02
PSEN1-209ENST00000553855 DDIT4Q9NX09 232 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 TOR4AQ9NXH8 423 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.66□□□□□ -1.02
PSEN1-209ENST00000553855 MARK1Q9P0L2 795 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 COX16Q9P0S2 106 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 DLGAP2Q9P1A6 1054 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 CYTH4Q9UIA0 394 aa8.66□□□□□ -1.02
PSEN1-209ENST00000553855 ZNF638Q14966 1978 aaKnown RBP8.66□□□□□ -1.02
PSEN1-209ENST00000553855 GREB1Q4ZG55 1949 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 CACNG3O60359 315 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 TSPAN3O60637 253 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 DAB1O75553 588 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 GRAP2O75791 330 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 ALDH1A2O94788 518 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 TRUB2O95900 331 aaKnown RBP8.65□□□□□ -1.02
PSEN1-209ENST00000553855 ERBB2P04626 1255 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 OPRD1P41143 372 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 MATKP42679 507 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 GABRB2P47870 512 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 SULT1E1P49888 294 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 NOMO3P69849 1222 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 KLHL30Q0D2K2 578 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 TCF15Q12870 199 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 NME3Q13232 169 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 TRIM14Q14142 442 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 NR1I3Q14994 352 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 ZNF528Q3MIS6 628 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 HSF5Q4G112 596 aaPredicted RBP8.65□□□□□ -1.02
PSEN1-209ENST00000553855 PTPN20Q4JDL3 420 aa8.65□□□□□ -1.02
PSEN1-209ENST00000553855 TDRD12Q587J7 1177 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms