RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 PWP1Q13610 501 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 PIGHQ14442 188 aaPredicted RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 RAB30Q15771 203 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 HADHQ16836 314 aaKnown RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 CFAP221Q4G0U5 840 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 SLC39A12Q504Y0 691 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 MEI1Q5TIA1 1274 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 TPGS2Q68CL5 300 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 PLEKHA7Q6IQ23 1121 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 DENND1BQ6P3S1 775 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 DNAJC24Q6P3W2 148 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 MON1BQ7L1V2 547 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 RTL10Q7L3V2 364 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 THAP5Q7Z6K1 395 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 DAAM2Q86T65 1068 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 PASD1Q8IV76 773 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 SCML4Q8N228 414 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 WDTC1Q8N5D0 677 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 C12orf29Q8N999 325 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 C3orf20Q8ND61 904 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 BHLHE22Q8NFJ8 381 aaPredicted RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 RIN3Q8TB24 985 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 UBA3Q8TBC4 463 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 ZNF564Q8TBZ8 553 aaPredicted RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 SLC2A14Q8TDB8 520 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 SLC35F5Q8WV83 523 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 CRELD1Q96HD1 420 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 PCED1BQ96HM7 432 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 KIRREL1Q96J84 757 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 RNPC3Q96LT9 517 aaKnown RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 C16orf45Q96MC5 204 aaPredicted RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 NAPGQ99747 312 aaPredicted RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 C11orf70Q9BRQ4 267 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 HERC2P3Q9BVR0 1158 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 NUP85Q9BW27 656 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 B3GNT5Q9BYG0 378 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 GPR62Q9BZJ7 368 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 THAP2Q9H0W7 228 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 FBXO44Q9H4M3 255 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 NGRNQ9NPE2 291 aaKnown RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 DMAP1Q9NPF5 467 aaPredicted RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 CRTAC1Q9NQ79 661 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 MRPL17Q9NRX2 175 aaKnown RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 CHST7Q9NS84 486 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 FAM49BQ9NUQ9 324 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 ASNSD1Q9NWL6 643 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 RRN3Q9NYV6 651 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 HSFX1Q9UBD0 423 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 CACNG4Q9UBN1 327 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 RNF14Q9UBS8 474 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 IP6K2Q9UHH9 426 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 DPP7Q9UHL4 492 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 DNAI1Q9UI46 699 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 MSRAQ9UJ68 235 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 REXO2Q9Y3B8 237 aaKnown RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 PCDHA11Q9Y5I1 949 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 ST14Q9Y5Y6 855 aa5.25□□□□□ -1.57
VTI1B-202ENST00000553619 MRPL42Q9Y6G3 142 aaKnown RBP5.25□□□□□ -1.57
VTI1B-202ENST00000553619 NCANO14594 1321 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 USP27XA6NNY8 438 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 MIF4GDA9UHW6 222 aaKnown RBP5.24□□□□□ -1.57
VTI1B-202ENST00000553619 ATP2C2O75185 946 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 FGF18O76093 207 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 MOCS3O95396 460 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 CXCL14O95715 111 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 TSPAN15O95858 294 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 CALCAP01258 141 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 ITGB1P05556 798 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 CTSAP10619 480 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 CCDC130P13994 396 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 TCP1P17987 556 aaKnown RBP5.24□□□□□ -1.57
VTI1B-202ENST00000553619 BDNFP23560 247 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 RRM1P23921 792 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 ACAT1P24752 427 aaKnown RBP5.24□□□□□ -1.57
VTI1B-202ENST00000553619 GBP1P32455 592 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 BMP8BP34820 402 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 OR1D2P34982 312 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 PAFAH1B1P43034 410 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 MAGEA10P43363 369 aaPredicted RBP5.24□□□□□ -1.57
VTI1B-202ENST00000553619 MAGEA11P43364 429 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 ALDH1A3P47895 512 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 ARPP19P56211 112 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 MAP3K7CLP57077 242 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 DAB2P98082 770 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 PDCLQ13371 301 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 PLD1Q13393 1074 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 MAMLD1Q13495 774 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 MESDQ14696 234 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 RPS6KA1Q15418 735 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 PSMD5Q16401 504 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 TAF12Q16514 161 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 ODF2Q5BJF6 829 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 SLC8B1Q6J4K2 584 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 PMF1Q6P1K2 205 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 SYT10Q6XYQ8 523 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 MMS22LQ6ZRQ5 1243 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 PAQR9Q6ZVX9 377 aa5.24□□□□□ -1.57
VTI1B-202ENST00000553619 ARCQ7LC44 396 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms