RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 PDGFRAP16234 1089 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 PGAM1P18669 254 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 AMPD1P23109 780 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 IL4RP24394 825 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 CDC25CP30307 473 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 SDC4P31431 198 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 HADHAP40939 763 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 HSPA13P48723 471 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 AQP5P55064 265 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 SESN3P58005 492 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 SP2Q02086 613 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 MBTD1Q05BQ5 628 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 CXCL9Q07325 125 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 CUL3Q13618 768 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 KRT81Q14533 505 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 PCLAFQ15004 111 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 HERC3Q15034 1050 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 SWI5Q1ZZU3 235 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 SLC5A9Q2M3M2 681 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 USP41Q3LFD5 358 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 LIN52Q52LA3 116 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 OXLD1Q5BKU9 147 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 KCNT1Q5JUK3 1230 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 CES4AQ5XG92 561 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 ARHGAP17Q68EM7 881 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 TRNP1Q6NT89 227 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 ZFP1Q6P2D0 407 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 LRRC8BQ6P9F7 803 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 SLC26A9Q7LBE3 791 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 STRADAQ7RTN6 431 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 TMEM110Q86TL2 294 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 SETD3Q86TU7 594 aaPredicted RBP5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 RIOX2Q8IUF8 465 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 APOBEC3FQ8IUX4 373 aaKnown RBP5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 CTAGE3PQ8IX95 158 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 DHX37Q8IY37 1157 aaKnown RBP5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 NDUFAF2Q8N183 169 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 EMC1Q8N766 993 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 RNF149Q8NC42 400 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 PCDH19Q8TAB3 1148 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 SLC7A14Q8TBB6 771 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 RDH11Q8TC12 318 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 PPP4R1Q8TF05 950 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 RXFP2Q8WXD0 754 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 HSPH1Q92598 858 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 FOXJ1Q92949 421 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 MRRFQ96E11 262 aaKnown RBP5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 CFAP36Q96G28 342 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 PRR11Q96HE9 360 aaPredicted RBP5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 WNK4Q96J92 1243 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 SPATA13Q96N96 652 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 TSPAN18Q96SJ8 248 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 KCNK16Q96T55 309 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 KLF6Q99612 283 aaPredicted RBP5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 FERMT1Q9BQL6 677 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 TCHPQ9BT92 498 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 SNRNP25Q9BV90 132 aaKnown RBP5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 SPATA16Q9BXB7 569 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 TRIM4Q9C037 500 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 S100A14Q9HCY8 104 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 SMYD2Q9NRG4 433 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 STK32BQ9NY57 414 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 C6orf203Q9P0P8 240 aaPredicted RBP5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 TJP2Q9UDY2 1190 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 BCAP29Q9UHQ4 241 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 PCDHB12Q9Y5F1 795 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 CDY2AQ9Y6F7 541 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 CDY1Q9Y6F8 540 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 WASF2Q9Y6W5 498 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 LTBP3Q9NS15 1303 aa5.41□□□□□ -1.54
TMEM55B-204ENST00000553602 ERI2A8K979 691 aaKnown RBP5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 CXorf49A8MYA2 514 aaPredicted RBP5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 KPNA7A9QM74 516 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 PRR5-ARHGAP8B1AHC4 643 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 SLCO1B7G3V0H7 640 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 H0YJX3 145 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 AP3B1O00203 1094 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 ZNF195O14628 629 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 ZBTB24O43167 697 aaPredicted RBP5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 DENRO43583 198 aaKnown RBP5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 HBP1O60381 514 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 SIN3BO75182 1162 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 DGKIO75912 1065 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 ITGBL1O95965 494 aaPredicted RBP5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 ALDOAP04075 364 aaKnown RBP5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 APRTP07741 180 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 PFKMP08237 780 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 NFICP08651 508 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 CXCL8P10145 99 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 UQCRBP14927 111 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 MX2P20592 715 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 CYP2F1P24903 491 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 RBL1P28749 1068 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 TCF7P36402 384 aaPredicted RBP5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 GP5P40197 560 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 GARSP41250 739 aaKnown RBP5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 PHKA2P46019 1235 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 RPS6KA3P51812 740 aa5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 ZNF135P52742 658 aaPredicted RBP5.4□□□□□ -1.54
TMEM55B-204ENST00000553602 AIF1P55008 147 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms