RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 MFN1Q8IWA4 741 aa23.61■■□□□ 1.37
TDP1-206ENST00000553569 ALLCQ8N6M5 410 aa23.61■■□□□ 1.37
TDP1-206ENST00000553569 WFDC5Q8TCV5 224 aa23.61■■□□□ 1.37
TDP1-206ENST00000553569 PRMT1Q99873 361 aaKnown RBP23.61■■□□□ 1.37
TDP1-206ENST00000553569 SLC2A11Q9BYW1 496 aa23.61■■□□□ 1.37
TDP1-206ENST00000553569 IRX2Q9BZI1 471 aaPredicted RBP23.61■■□□□ 1.37
TDP1-206ENST00000553569 SIK2Q9H0K1 926 aa23.61■■□□□ 1.37
TDP1-206ENST00000553569 TMPRSS4Q9NRS4 437 aa23.61■■□□□ 1.37
TDP1-206ENST00000553569 ZNHIT6Q9NWK9 470 aaKnown RBP23.61■■□□□ 1.37
TDP1-206ENST00000553569 CNOT8Q9UFF9 292 aaKnown RBP23.61■■□□□ 1.37
TDP1-206ENST00000553569 SLC27A6Q9Y2P4 619 aa23.61■■□□□ 1.37
TDP1-206ENST00000553569 SNX10Q9Y5X0 201 aa23.61■■□□□ 1.37
TDP1-206ENST00000553569 HS3ST4Q9Y661 456 aa23.61■■□□□ 1.37
TDP1-206ENST00000553569 A0A087X0T9 212 aa23.6■■□□□ 1.37
TDP1-206ENST00000553569 FAM228BP0C875 321 aa23.6■■□□□ 1.37
TDP1-206ENST00000553569 EIF4A3P38919 411 aaKnown RBP23.6■■□□□ 1.37
TDP1-206ENST00000553569 KIR2DL1P43626 348 aaPredicted RBP23.6■■□□□ 1.37
TDP1-206ENST00000553569 MTA1Q13330 715 aa23.6■■□□□ 1.37
TDP1-206ENST00000553569 PPP1R15BQ5SWA1 713 aa23.6■■□□□ 1.37
TDP1-206ENST00000553569 MPP7Q5T2T1 576 aa23.6■■□□□ 1.37
TDP1-206ENST00000553569 EGFLAMQ63HQ2 1017 aa23.6■■□□□ 1.37
TDP1-206ENST00000553569 MAMSTRQ6ZN01 415 aa23.6■■□□□ 1.37
TDP1-206ENST00000553569 CIR1Q86X95 450 aaPredicted RBP23.6■■□□□ 1.37
TDP1-206ENST00000553569 CARNMT1Q8N4J0 409 aa23.6■■□□□ 1.37
TDP1-206ENST00000553569 ZNF513Q8N8E2 541 aaPredicted RBP23.6■■□□□ 1.37
TDP1-206ENST00000553569 FAM172AQ8WUF8 416 aa23.6■■□□□ 1.37
TDP1-206ENST00000553569 ANP32EQ9BTT0 268 aa23.6■■□□□ 1.37
TDP1-206ENST00000553569 IRF2BPLQ9H1B7 796 aa23.6■■□□□ 1.37
TDP1-206ENST00000553569 ABCB8Q9NUT2 735 aa23.6■■□□□ 1.37
TDP1-206ENST00000553569 PARVAQ9NVD7 372 aa23.6■■□□□ 1.37
TDP1-206ENST00000553569 MYO1AQ9UBC5 1043 aa23.6■■□□□ 1.37
TDP1-206ENST00000553569 SLC8A2Q9UPR5 921 aa23.6■■□□□ 1.37
TDP1-206ENST00000553569 MYO18AQ92614 2054 aaKnown RBP23.6■■□□□ 1.37
TDP1-206ENST00000553569 WDFY4Q6ZS81 3184 aa23.59■■□□□ 1.37
TDP1-206ENST00000553569 I6L893 689 aaPredicted RBP23.59■■□□□ 1.37
TDP1-206ENST00000553569 CCP110O43303 1012 aa23.59■■□□□ 1.37
TDP1-206ENST00000553569 CHRM1P11229 460 aaPredicted RBP23.59■■□□□ 1.37
TDP1-206ENST00000553569 HLA-FP30511 346 aa23.59■■□□□ 1.37
TDP1-206ENST00000553569 HOXC13P31276 330 aa23.59■■□□□ 1.37
TDP1-206ENST00000553569 MAMLD1Q13495 774 aa23.59■■□□□ 1.37
TDP1-206ENST00000553569 CDH18Q13634 790 aa23.59■■□□□ 1.37
TDP1-206ENST00000553569 AUHQ13825 339 aaKnown RBP23.59■■□□□ 1.37
TDP1-206ENST00000553569 DMC1Q14565 340 aa23.59■■□□□ 1.37
TDP1-206ENST00000553569 IL17RCQ8NAC3 791 aa23.59■■□□□ 1.37
TDP1-206ENST00000553569 TXNDC5Q8NBS9 432 aaKnown RBP23.59■■□□□ 1.37
TDP1-206ENST00000553569 TRIM11Q96F44 468 aa23.59■■□□□ 1.37
TDP1-206ENST00000553569 RPRD1AQ96P16 312 aaPredicted RBP23.59■■□□□ 1.37
TDP1-206ENST00000553569 HHIPQ96QV1 700 aa23.59■■□□□ 1.37
TDP1-206ENST00000553569 ISCUQ9H1K1 167 aa23.59■■□□□ 1.37
TDP1-206ENST00000553569 TMEM51Q9NW97 253 aa23.59■■□□□ 1.37
TDP1-206ENST00000553569 VANGL2Q9ULK5 521 aa23.59■■□□□ 1.37
TDP1-206ENST00000553569 ARIH1Q9Y4X5 557 aaPredicted RBP23.59■■□□□ 1.37
TDP1-206ENST00000553569 AKR1B15C9JRZ8 316 aaPredicted RBP23.58■■□□□ 1.37
TDP1-206ENST00000553569 ENDOD1O94919 500 aa23.58■■□□□ 1.37
TDP1-206ENST00000553569 TBX2Q13207 712 aaPredicted RBP23.58■■□□□ 1.37
TDP1-206ENST00000553569 ARID5BQ14865 1188 aa23.58■■□□□ 1.37
TDP1-206ENST00000553569 RABGAP1LQ5R372 815 aa23.58■■□□□ 1.37
TDP1-206ENST00000553569 PLEKHA7Q6IQ23 1121 aa23.58■■□□□ 1.37
TDP1-206ENST00000553569 FBXL22Q6P050 247 aa23.58■■□□□ 1.37
TDP1-206ENST00000553569 SYT13Q7L8C5 426 aa23.58■■□□□ 1.37
TDP1-206ENST00000553569 STRADAQ7RTN6 431 aa23.58■■□□□ 1.37
TDP1-206ENST00000553569 C14orf80Q86SX3 495 aa23.58■■□□□ 1.37
TDP1-206ENST00000553569 CNGA4Q8IV77 575 aa23.58■■□□□ 1.37
TDP1-206ENST00000553569 CCDC117Q8IWD4 279 aaPredicted RBP23.58■■□□□ 1.37
TDP1-206ENST00000553569 DRC7Q8IY82 874 aa23.58■■□□□ 1.37
TDP1-206ENST00000553569 CIPCQ9C0C6 399 aa23.58■■□□□ 1.37
TDP1-206ENST00000553569 DEF6Q9H4E7 631 aa23.58■■□□□ 1.37
TDP1-206ENST00000553569 GGA2Q9UJY4 613 aa23.58■■□□□ 1.37
TDP1-206ENST00000553569 HCN2Q9UL51 889 aa23.58■■□□□ 1.37
TDP1-206ENST00000553569 MMP17Q9ULZ9 603 aa23.58■■□□□ 1.37
TDP1-206ENST00000553569 K7ESF4 209 aa23.57■■□□□ 1.36
TDP1-206ENST00000553569 LUC7L3O95232 432 aaKnown RBP23.57■■□□□ 1.36
TDP1-206ENST00000553569 PAPSS2O95340 614 aaPredicted RBP23.57■■□□□ 1.36
TDP1-206ENST00000553569 MYBL1P10243 752 aa23.57■■□□□ 1.36
TDP1-206ENST00000553569 TDGF1P13385 188 aa23.57■■□□□ 1.36
TDP1-206ENST00000553569 CD70P32970 193 aa23.57■■□□□ 1.36
TDP1-206ENST00000553569 WASP42768 502 aa23.57■■□□□ 1.36
TDP1-206ENST00000553569 IRAK1P51617 712 aa23.57■■□□□ 1.36
TDP1-206ENST00000553569 ZNF143P52747 638 aaPredicted RBP23.57■■□□□ 1.36
TDP1-206ENST00000553569 HDAC4P56524 1084 aa23.57■■□□□ 1.36
TDP1-206ENST00000553569 OGDHQ02218 1023 aa23.57■■□□□ 1.36
TDP1-206ENST00000553569 NHLH1Q02575 133 aa23.57■■□□□ 1.36
TDP1-206ENST00000553569 GFPT1Q06210 699 aaPredicted RBP23.57■■□□□ 1.36
TDP1-206ENST00000553569 DMWDQ09019 674 aa23.57■■□□□ 1.36
TDP1-206ENST00000553569 ZNF528Q3MIS6 628 aa23.57■■□□□ 1.36
TDP1-206ENST00000553569 CCDC122Q5T0U0 273 aa23.57■■□□□ 1.36
TDP1-206ENST00000553569 RNF43Q68DV7 783 aa23.57■■□□□ 1.36
TDP1-206ENST00000553569 HEATR6Q6AI08 1181 aaKnown RBP23.57■■□□□ 1.36
TDP1-206ENST00000553569 ALKBH5Q6P6C2 394 aaKnown RBP23.57■■□□□ 1.36
TDP1-206ENST00000553569 TRMT11Q7Z4G4 463 aaKnown RBP23.57■■□□□ 1.36
TDP1-206ENST00000553569 IGSF8Q969P0 613 aa23.57■■□□□ 1.36
TDP1-206ENST00000553569 MRFAP1L1Q96HT8 127 aa23.57■■□□□ 1.36
TDP1-206ENST00000553569 SCINQ9Y6U3 715 aa23.57■■□□□ 1.36
TDP1-206ENST00000553569 H0Y626 953 aa23.56■■□□□ 1.36
TDP1-206ENST00000553569 SGK1O00141 431 aa23.56■■□□□ 1.36
TDP1-206ENST00000553569 PABPC1P11940 636 aaKnown RBP23.56■■□□□ 1.36
TDP1-206ENST00000553569 LMAN2Q12907 356 aa23.56■■□□□ 1.36
TDP1-206ENST00000553569 HSF5Q4G112 596 aaPredicted RBP23.56■■□□□ 1.36
TDP1-206ENST00000553569 EOGTQ5NDL2 527 aa23.56■■□□□ 1.36
TDP1-206ENST00000553569 TTC39BQ5VTQ0 682 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms