RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 PTPN1P18031 435 aaKnown RBP13.29□□□□□ -0.28
SHMT2-205ENST00000553474 BGNP21810 368 aa13.29□□□□□ -0.28
SHMT2-205ENST00000553474 AMPD1P23109 780 aa13.29□□□□□ -0.28
SHMT2-205ENST00000553474 CCND3P30281 292 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-205ENST00000553474 LHX1P48742 406 aa13.29□□□□□ -0.28
SHMT2-205ENST00000553474 ZBTB16Q05516 673 aa13.29□□□□□ -0.28
SHMT2-205ENST00000553474 DCAF6Q58WW2 860 aa13.29□□□□□ -0.28
SHMT2-205ENST00000553474 ARHGAP24Q8N264 748 aa13.29□□□□□ -0.28
SHMT2-205ENST00000553474 ENDOVQ8N8Q3 282 aaKnown RBP13.29□□□□□ -0.28
SHMT2-205ENST00000553474 COLGALT1Q8NBJ5 622 aa13.29□□□□□ -0.28
SHMT2-205ENST00000553474 TRPV1Q8NER1 839 aa13.29□□□□□ -0.28
SHMT2-205ENST00000553474 NSL1Q96IY1 281 aa13.29□□□□□ -0.28
SHMT2-205ENST00000553474 APOL6Q9BWW8 343 aa13.29□□□□□ -0.28
SHMT2-205ENST00000553474 RNPEPL1Q9HAU8 725 aa13.29□□□□□ -0.28
SHMT2-205ENST00000553474 CNGB3Q9NQW8 809 aa13.29□□□□□ -0.28
SHMT2-205ENST00000553474 SMYD2Q9NRG4 433 aa13.29□□□□□ -0.28
SHMT2-205ENST00000553474 KANSL3Q9P2N6 904 aa13.29□□□□□ -0.28
SHMT2-205ENST00000553474 DCTN4Q9UJW0 460 aa13.29□□□□□ -0.28
SHMT2-205ENST00000553474 C17orf102A2RUQ5 167 aa13.28□□□□□ -0.28
SHMT2-205ENST00000553474 GLRA3O75311 464 aa13.28□□□□□ -0.28
SHMT2-205ENST00000553474 DNAJB2P25686 324 aa13.28□□□□□ -0.28
SHMT2-205ENST00000553474 TMPRSS15P98073 1019 aa13.28□□□□□ -0.28
SHMT2-205ENST00000553474 OCRLQ01968 901 aa13.28□□□□□ -0.28
SHMT2-205ENST00000553474 NIPAL4Q0D2K0 466 aa13.28□□□□□ -0.28
SHMT2-205ENST00000553474 DPYSQ14117 519 aa13.28□□□□□ -0.28
SHMT2-205ENST00000553474 SYCP2LQ5T4T6 812 aa13.28□□□□□ -0.28
SHMT2-205ENST00000553474 FAM131BQ86XD5 332 aa13.28□□□□□ -0.28
SHMT2-205ENST00000553474 CRLF3Q8IUI8 442 aa13.28□□□□□ -0.28
SHMT2-205ENST00000553474 NUDCD3Q8IVD9 361 aa13.28□□□□□ -0.28
SHMT2-205ENST00000553474 NDUFAF2Q8N183 169 aa13.28□□□□□ -0.28
SHMT2-205ENST00000553474 SMG8Q8ND04 991 aaKnown RBP13.28□□□□□ -0.28
SHMT2-205ENST00000553474 TMEM40Q8WWA1 233 aa13.28□□□□□ -0.28
SHMT2-205ENST00000553474 PTCD3Q96EY7 689 aaKnown RBP13.28□□□□□ -0.28
SHMT2-205ENST00000553474 P2RY11Q96G91 374 aa13.28□□□□□ -0.28
SHMT2-205ENST00000553474 PPP1R10Q96QC0 940 aaKnown RBP13.28□□□□□ -0.28
SHMT2-205ENST00000553474 THAP1Q9NVV9 213 aa13.28□□□□□ -0.28
SHMT2-205ENST00000553474 DCDC2Q9UHG0 476 aa13.28□□□□□ -0.28
SHMT2-205ENST00000553474 M0QYT0 321 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 RNF103O00237 685 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 CYB561D2O14569 222 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 MFSD11O43934 449 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 KPNA6O60684 536 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 SNNO75324 88 aaPredicted RBP13.27□□□□□ -0.28
SHMT2-205ENST00000553474 MAP3K6O95382 1288 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 CBX6O95503 412 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 F9P00740 461 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 POLBP06746 335 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 BPGMP07738 259 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 FAM200BP0CF97 657 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 VAV1P15498 845 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 PAX3P23760 479 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 ATXN1P54253 815 aaKnown RBP13.27□□□□□ -0.28
SHMT2-205ENST00000553474 DEUP1Q05D60 604 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 ZNF33AQ06730 810 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 SOX4Q06945 474 aaPredicted RBP13.27□□□□□ -0.28
SHMT2-205ENST00000553474 OVGP1Q12889 678 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 ARL13BQ3SXY8 428 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 TLDC1Q6P9B6 456 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 FBXO46Q6PJ61 603 aaPredicted RBP13.27□□□□□ -0.28
SHMT2-205ENST00000553474 CDHR3Q6ZTQ4 885 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 CLEC20AQ6ZU45 233 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 DENND5BQ6ZUT9 1274 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 RFX8Q6ZV50 586 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 LONP2Q86WA8 852 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 STKLD1Q8NE28 680 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 FAM13CQ8NE31 585 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 ARMC2Q8NEN0 867 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 VAT1Q99536 393 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 AP5M1Q9H0R1 490 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 DCLRE1BQ9H816 532 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 BATF3Q9NR55 127 aa13.27□□□□□ -0.28
SHMT2-205ENST00000553474 HMX2A2RU54 273 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 EEF2KO00418 725 aaKnown RBP13.27□□□□□ -0.29
SHMT2-205ENST00000553474 DCLK1O15075 740 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 IGHA2P01877 340 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 MYCNP04198 464 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-205ENST00000553474 MYL2P10916 166 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 AKR1A1P14550 325 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 MX2P20592 715 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 TKTP29401 623 aaKnown RBP13.27□□□□□ -0.29
SHMT2-205ENST00000553474 SERPINB3P29508 390 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 GARSP41250 739 aaKnown RBP13.27□□□□□ -0.29
SHMT2-205ENST00000553474 AP1B1Q10567 949 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 BST1Q10588 318 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 WASHC5Q12768 1159 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 TEX44Q53QW1 395 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 SPANXN3Q5MJ09 141 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 OTUD1Q5VV17 481 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-205ENST00000553474 TRMT10BQ6PF06 316 aaKnown RBP13.27□□□□□ -0.29
SHMT2-205ENST00000553474 MYCBPQ99417 103 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-205ENST00000553474 LGMNQ99538 433 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 TRIM62Q9BVG3 475 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 SLC13A1Q9BZW2 595 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 C12orf65Q9H3J6 166 aaKnown RBP13.27□□□□□ -0.29
SHMT2-205ENST00000553474 CHST12Q9NRB3 414 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 KLK14Q9P0G3 267 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 ADAM28Q9UKQ2 775 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 TRHDEQ9UKU6 1024 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 L3MBTL1Q9Y468 752 aa13.27□□□□□ -0.29
SHMT2-205ENST00000553474 MAGEB16A2A368 324 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms