RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 COX16Q9P0S2 106 aa15.88■□□□□ 0.13
SHMT2-204ENST00000553324 KIAA1522Q9P206 1035 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-204ENST00000553324 STIM2Q9P246 746 aa15.88■□□□□ 0.13
SHMT2-204ENST00000553324 STON1Q9Y6Q2 735 aa15.88■□□□□ 0.13
SHMT2-204ENST00000553324 FANCMQ8IYD8 2048 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 ATG2BQ96BY7 2078 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 H0Y626 953 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 ZNF217O75362 1048 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 MOCS3O95396 460 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 CALB1P05937 261 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 POLR2EP19388 210 aaKnown RBP15.87■□□□□ 0.13
SHMT2-204ENST00000553324 TACR2P21452 398 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 WASP42768 502 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 UBASH3AP57075 661 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 RPS24P62847 133 aaKnown RBP15.87■□□□□ 0.13
SHMT2-204ENST00000553324 PITX1P78337 314 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-204ENST00000553324 FANCCQ00597 558 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 CENPCQ03188 943 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 DEUP1Q05D60 604 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 SLC12A1Q13621 1099 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 CDH18Q13634 790 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 LPAL2Q16609 132 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 CLEC16AQ2KHT3 1053 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 RAP1GAP2Q684P5 730 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 MMS22LQ6ZRQ5 1243 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 CHST9Q7L1S5 443 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 IRF2BP2Q7Z5L9 587 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 LGI2Q8N0V4 545 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 CARNMT1Q8N4J0 409 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 FAM160A2Q8N612 972 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-204ENST00000553324 OLIG1Q8TAK6 271 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 HMGB4Q8WW32 186 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 IQCDQ96DY2 449 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 SEPT11Q9NVA2 429 aaKnown RBP15.87■□□□□ 0.13
SHMT2-204ENST00000553324 CACNA2D2Q9NY47 1150 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 ADAM22Q9P0K1 906 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 TMEM59LQ9UK28 342 aa15.87■□□□□ 0.13
SHMT2-204ENST00000553324 GOLGA8SH3BPF8 625 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 LUC7L3O95232 432 aaKnown RBP15.86■□□□□ 0.13
SHMT2-204ENST00000553324 DLDP09622 509 aaKnown RBP15.86■□□□□ 0.13
SHMT2-204ENST00000553324 TNFAIP3P21580 790 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 CXCR3P49682 368 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 SULT1E1P49888 294 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 SGSHP51688 502 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 GSCP56915 257 aaPredicted RBP15.86■□□□□ 0.13
SHMT2-204ENST00000553324 ZNF234Q14588 700 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 PLK5Q496M5 336 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 FIGNQ5HY92 759 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 SPDYCQ5MJ68 293 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 TMEM215Q68D42 235 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 MBLAC2Q68D91 279 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 SERPINA13PQ6UXR4 307 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 ADIPOR2Q86V24 386 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 KBTBD6Q86V97 674 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 PHF13Q86YI8 300 aaPredicted RBP15.86■□□□□ 0.13
SHMT2-204ENST00000553324 CFAP52Q8N1V2 620 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 DCLK2Q8N568 766 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 SLC30A5Q8TAD4 765 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 BAP1Q92560 729 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 C1orf74Q96LT6 269 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 PRICKLE1Q96MT3 831 aaPredicted RBP15.86■□□□□ 0.13
SHMT2-204ENST00000553324 PRMT1Q99873 361 aaKnown RBP15.86■□□□□ 0.13
SHMT2-204ENST00000553324 TPSD1Q9BZJ3 242 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 ARHGEF38Q9NXL2 777 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 AIPL1Q9NZN9 384 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 XPO7Q9UIA9 1087 aaKnown RBP15.86■□□□□ 0.13
SHMT2-204ENST00000553324 PCDHGA5Q9Y5G8 931 aa15.86■□□□□ 0.13
SHMT2-204ENST00000553324 FRYLO94915 3013 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 WASH3PC4AMC7 463 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 MAP3K13O43283 966 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 ASLP04424 464 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 TPM3P06753 285 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 KRT3P12035 628 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 RDXP35241 583 aaKnown RBP15.85■□□□□ 0.13
SHMT2-204ENST00000553324 P2RY2P41231 377 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 IL12RB1P42701 662 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 ST8SIA6P61647 398 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 C1QBPQ07021 282 aaKnown RBP15.85■□□□□ 0.13
SHMT2-204ENST00000553324 AUHQ13825 339 aaKnown RBP15.85■□□□□ 0.13
SHMT2-204ENST00000553324 C2CD6Q53TS8 623 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 SFMBT2Q5VUG0 894 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 SLC36A4Q6YBV0 504 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 TTC17Q96AE7 1141 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 VCPIP1Q96JH7 1222 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 HAPLN3Q96S86 360 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 PCDHB18PQ96TA0 734 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 C11orf70Q9BRQ4 267 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 TKTL2Q9H0I9 626 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 DUSP15Q9H1R2 295 aaPredicted RBP15.85■□□□□ 0.13
SHMT2-204ENST00000553324 PIGVQ9NUD9 493 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 SUN2Q9UH99 717 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 FAM186AA6NE01 2351 aa15.85■□□□□ 0.13
SHMT2-204ENST00000553324 A0A1B0GVM2 712 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 ANKRD62A6NC57 917 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 TCAF2A6NFQ2 919 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 LRRC53A6NM62 1247 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 PAGE1O75459 146 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 ENDOD1O94919 500 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 PDGFRAP16234 1089 aa15.84■□□□□ 0.13
SHMT2-204ENST00000553324 GABRG2P18507 467 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms