RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 LSM14AQ8ND56 463 aaKnown RBP5.57□□□□□ -1.52
SCFD1-209ENST00000553280 RP9Q8TA86 221 aaKnown RBP5.57□□□□□ -1.52
SCFD1-209ENST00000553280 CLEC4CQ8WTT0 213 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 SLC25A43Q8WUT9 341 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-209ENST00000553280 RFKQ969G6 155 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 ERP27Q96DN0 273 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 CINPQ9BW66 212 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-209ENST00000553280 PDCL3Q9H2J4 239 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 SYNPO2LQ9H987 977 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 PDE11AQ9HCR9 933 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 CD207Q9UJ71 328 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 AMFRQ9UKV5 643 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 ENTPD2Q9Y5L3 495 aa5.57□□□□□ -1.52
SCFD1-209ENST00000553280 AP4M1O00189 453 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 CES2O00748 559 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 ZNF202O95125 648 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 WEE2P0C1S8 567 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 EGR2P11161 476 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-209ENST00000553280 MATN1P21941 496 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 RPS6KB1P23443 525 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 CTGFP29279 349 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 GPD2P43304 727 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 TPTEP56180 551 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 TAS2R50P59544 299 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 FAM205BPQ63HN1 556 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 INO80CQ6PI98 192 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-209ENST00000553280 KIAA1324Q6UXG2 1013 aaKnown RBP5.56□□□□□ -1.52
SCFD1-209ENST00000553280 Q6ZWC4 215 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 NGEFQ8N5V2 710 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 SERINC2Q96SA4 455 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 CDCP1Q9H5V8 836 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 PPP1R14DQ9NXH3 145 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 KCTD5Q9NXV2 234 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 TBC1D14Q9P2M4 693 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 SLC25A10Q9UBX3 287 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-209ENST00000553280 SUFUQ9UMX1 484 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 FZD1Q9UP38 647 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 NAALADL1Q9UQQ1 740 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 PCDHB2Q9Y5E7 798 aa5.56□□□□□ -1.52
SCFD1-209ENST00000553280 COPG1Q9Y678 874 aaKnown RBP5.56□□□□□ -1.52
SCFD1-209ENST00000553280 FAM90A7PA6NKC0 464 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 SH2D7A6NKC9 451 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-209ENST00000553280 C3orf70A6NLC5 250 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-209ENST00000553280 FAM90A22PA8MWA6 464 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 FAM90A12PA8MX19 464 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 FAM90A23PA8MXZ1 464 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 H3BNC9 293 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 GRM8O00222 908 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 ZNF213O14771 459 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 TSPAN4O14817 238 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 DOK2O60496 412 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 ZFXP17010 805 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-209ENST00000553280 IGFBP2P18065 325 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 DUSP1P28562 367 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 DIO1P49895 249 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 DRG2P55039 364 aaKnown RBP5.55□□□□□ -1.52
SCFD1-209ENST00000553280 TXNL4AP83876 142 aaKnown RBP5.55□□□□□ -1.52
SCFD1-209ENST00000553280 CCDC15Q0P6D6 951 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 PTP4A2Q12974 167 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 FHL2Q14192 279 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 MEA1Q16626 185 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 TBC1D25Q3MII6 688 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 TIGD2Q4W5G0 525 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 FAM69AQ5T7M9 428 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 DENND2CQ68D51 928 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 KIAA0895LQ68EN5 471 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 B4GALNT4Q76KP1 1039 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 DIS3L2Q8IYB7 885 aaKnown RBP5.55□□□□□ -1.52
SCFD1-209ENST00000553280 NFKBIDQ8NI38 313 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 SH3KBP1Q96B97 665 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 FBXL20Q96IG2 436 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 PBKQ96KB5 322 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 TIGD1Q96MW7 591 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 SDF4Q9BRK5 362 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 ELOVL1Q9BW60 279 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 USP44Q9H0E7 712 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 SNX15Q9NRS6 342 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 KRT84Q9NSB2 600 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 NSMCE4AQ9NXX6 385 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 CCNL1Q9UK58 526 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-209ENST00000553280 GPR34Q9UPC5 381 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 TTLL3Q9Y4R7 772 aa5.55□□□□□ -1.52
SCFD1-209ENST00000553280 GOLGA6L10A0A0M3HER8 536 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 CENPVL1A0A0U1RR11 272 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 PIPSLA2A3N6 862 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 TNPO2O14787 897 aaKnown RBP5.54□□□□□ -1.52
SCFD1-209ENST00000553280 MPPED1O15442 326 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 SUV39H1O43463 412 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 NARSO43776 548 aaKnown RBP5.54□□□□□ -1.52
SCFD1-209ENST00000553280 PEX1O43933 1283 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 ZNF500O60304 480 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-209ENST00000553280 TIPRLO75663 272 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 C1RP00736 705 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 MBPP02686 304 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-209ENST00000553280 ALDOAP04075 364 aaKnown RBP5.54□□□□□ -1.52
SCFD1-209ENST00000553280 CHRM2P08172 466 aa5.54□□□□□ -1.52
SCFD1-209ENST00000553280 HSPA1AP0DMV8 641 aaKnown RBP5.54□□□□□ -1.52
SCFD1-209ENST00000553280 HSPA1BP0DMV9 641 aaKnown RBP5.54□□□□□ -1.52
SCFD1-209ENST00000553280 MYCLP12524 364 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-209ENST00000553280 PRKCHP24723 683 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms