RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 ENDOD1O94919 500 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 TACR2P21452 398 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 BCKDHBP21953 392 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 ZNF234Q14588 700 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 ZSCAN23Q3MJ62 389 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 RAP1GAP2Q684P5 730 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 LUZP1Q86V48 1076 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 CHPFQ8IZ52 775 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 HJURPQ8NCD3 748 aaPredicted RBP19.97■□□□□ 0.79
PTCH1-227ENST00000553256 WFIKKN2Q8TEU8 576 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 TTC17Q96AE7 1141 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 TMEM245Q9H330 911 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 FAM204AQ9H8W3 233 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 ABCB8Q9NUT2 735 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 RRN3Q9NYV6 651 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.97■□□□□ 0.79
PTCH1-227ENST00000553256 GGA2Q9UJY4 613 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 CKAP5Q14008 2032 aa19.97■□□□□ 0.79
PTCH1-227ENST00000553256 LAMA1P25391 3075 aa19.96■□□□□ 0.79
PTCH1-227ENST00000553256 FAM170AA1A519 330 aa19.96■□□□□ 0.79
PTCH1-227ENST00000553256 LRP3O75074 770 aa19.96■□□□□ 0.79
PTCH1-227ENST00000553256 EPN2O95208 641 aa19.96■□□□□ 0.79
PTCH1-227ENST00000553256 ADCY5O95622 1261 aa19.96■□□□□ 0.79
PTCH1-227ENST00000553256 MOCS2O96007 188 aaPredicted RBP19.96■□□□□ 0.79
PTCH1-227ENST00000553256 PABPC1P11940 636 aaKnown RBP19.96■□□□□ 0.79
PTCH1-227ENST00000553256 NDUFV2P19404 249 aa19.96■□□□□ 0.79
PTCH1-227ENST00000553256 CCR1P32246 355 aa19.96■□□□□ 0.79
PTCH1-227ENST00000553256 LMAN2Q12907 356 aa19.96■□□□□ 0.79
PTCH1-227ENST00000553256 CLEC16AQ2KHT3 1053 aa19.96■□□□□ 0.79
PTCH1-227ENST00000553256 SLC25A52Q3SY17 297 aa19.96■□□□□ 0.79
PTCH1-227ENST00000553256 FUT11Q495W5 492 aa19.96■□□□□ 0.79
PTCH1-227ENST00000553256 PLA2G2CQ5R387 149 aa19.96■□□□□ 0.79
PTCH1-227ENST00000553256 FBXL22Q6P050 247 aa19.96■□□□□ 0.79
PTCH1-227ENST00000553256 TRIM72Q6ZMU5 477 aa19.96■□□□□ 0.79
PTCH1-227ENST00000553256 MMS22LQ6ZRQ5 1243 aa19.96■□□□□ 0.79
PTCH1-227ENST00000553256 PHF13Q86YI8 300 aaPredicted RBP19.96■□□□□ 0.79
PTCH1-227ENST00000553256 SLC30A5Q8TAD4 765 aa19.96■□□□□ 0.79
PTCH1-227ENST00000553256 DDX50Q9BQ39 737 aaKnown RBP19.96■□□□□ 0.79
PTCH1-227ENST00000553256 SYNCQ9H7C4 482 aa19.96■□□□□ 0.79
PTCH1-227ENST00000553256 HS3ST4Q9Y661 456 aa19.96■□□□□ 0.79
PTCH1-227ENST00000553256 M0QYT0 321 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 APOEP02649 317 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 SLC2A3P11169 496 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 PTMSP20962 102 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 PRKCHP24723 683 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 IRAK1P51617 712 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 COPAP53621 1224 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 ATXN1P54253 815 aaKnown RBP19.95■□□□□ 0.78
PTCH1-227ENST00000553256 FAM102AQ5T9C2 384 aaPredicted RBP19.95■□□□□ 0.78
PTCH1-227ENST00000553256 PMS2CLQ68D20 193 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 CEP68Q76N32 757 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 CHST9Q7L1S5 443 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 C14orf80Q86SX3 495 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 AHI1Q8N157 1196 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 CFAP52Q8N1V2 620 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 HMGB4Q8WW32 186 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 RLN3Q8WXF3 142 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 IGSF8Q969P0 613 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 MRGPRX3Q96LB0 322 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 MRGPRX1Q96LB2 322 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 TBCBQ99426 244 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 MKRN2Q9H000 416 aaKnown RBP19.95■□□□□ 0.78
PTCH1-227ENST00000553256 PDCL3Q9H2J4 239 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 NCDNQ9UBB6 729 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 INVSQ9Y283 1065 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 CACNA1AO00555 2505 aa19.95■□□□□ 0.78
PTCH1-227ENST00000553256 PAGE1O75459 146 aa19.94■□□□□ 0.78
PTCH1-227ENST00000553256 ALDH1A2O94788 518 aa19.94■□□□□ 0.78
PTCH1-227ENST00000553256 LUC7L3O95232 432 aaKnown RBP19.94■□□□□ 0.78
PTCH1-227ENST00000553256 GBP1P32455 592 aa19.94■□□□□ 0.78
PTCH1-227ENST00000553256 USP39Q53GS9 565 aaKnown RBP19.94■□□□□ 0.78
PTCH1-227ENST00000553256 RAB6CQ53S08 254 aa19.94■□□□□ 0.78
PTCH1-227ENST00000553256 FIGNQ5HY92 759 aa19.94■□□□□ 0.78
PTCH1-227ENST00000553256 MBLAC2Q68D91 279 aa19.94■□□□□ 0.78
PTCH1-227ENST00000553256 CXorf57Q6NSI4 855 aaKnown RBP19.94■□□□□ 0.78
PTCH1-227ENST00000553256 MON1BQ7L1V2 547 aa19.94■□□□□ 0.78
PTCH1-227ENST00000553256 METTL3Q86U44 580 aaKnown RBP19.94■□□□□ 0.78
PTCH1-227ENST00000553256 MFN1Q8IWA4 741 aa19.94■□□□□ 0.78
PTCH1-227ENST00000553256 KIAA2013Q8IYS2 634 aa19.94■□□□□ 0.78
PTCH1-227ENST00000553256 LGI2Q8N0V4 545 aa19.94■□□□□ 0.78
PTCH1-227ENST00000553256 ATP6V0D2Q8N8Y2 350 aa19.94■□□□□ 0.78
PTCH1-227ENST00000553256 ALG14Q96F25 216 aa19.94■□□□□ 0.78
PTCH1-227ENST00000553256 AGPAT1Q99943 283 aa19.94■□□□□ 0.78
PTCH1-227ENST00000553256 RAB6CQ9H0N0 254 aa19.94■□□□□ 0.78
PTCH1-227ENST00000553256 SLC6A17Q9H1V8 727 aa19.94■□□□□ 0.78
PTCH1-227ENST00000553256 CD93Q9NPY3 652 aa19.94■□□□□ 0.78
PTCH1-227ENST00000553256 GMEB2Q9UKD1 530 aa19.94■□□□□ 0.78
PTCH1-227ENST00000553256 C2CD4BA6NLJ0 364 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 CAVIN2O95810 425 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 DLDP09622 509 aaKnown RBP19.93■□□□□ 0.78
PTCH1-227ENST00000553256 RNASE9P60153 205 aaKnown RBP19.93■□□□□ 0.78
PTCH1-227ENST00000553256 SPEM2Q0P670 501 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 NME3Q13232 169 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 CAMK2GQ13555 558 aaPredicted RBP19.93■□□□□ 0.78
PTCH1-227ENST00000553256 AUHQ13825 339 aaKnown RBP19.93■□□□□ 0.78
PTCH1-227ENST00000553256 BRMS1LQ5PSV4 323 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 PPP1R15BQ5SWA1 713 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 CHSY1Q86X52 802 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 EMC1Q8N766 993 aa19.93■□□□□ 0.78
PTCH1-227ENST00000553256 ZNF557Q8N988 423 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms