RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 PID1Q7Z2X4 250 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 TDRPQ86YL5 185 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 CASP10Q92851 521 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 AGAP3Q96P47 875 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 CYTH2Q99418 400 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 TRIM62Q9BVG3 475 aa9.36□□□□□ -0.91
RAB3IP-218ENST00000553099 SF3B1O75533 1304 aaKnown RBP eCLIP9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 GOLGA8RI6L899 631 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 TNFRSF10BO14763 440 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 IRAK2O43187 625 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 ALDH2P05091 517 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 CA4P22748 312 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 GBP2P32456 591 aaPredicted RBP9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 ZKSCAN8Q15776 578 aaPredicted RBP9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 TCTN1Q2MV58 587 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 ZNF534Q76KX8 674 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 LRRC34Q8IZ02 419 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 ZNF567Q8N184 647 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 MPP5Q8N3R9 675 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 CASD1Q96PB1 797 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 KLF6Q99612 283 aaPredicted RBP9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 SEPT5Q99719 369 aaPredicted RBP9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 FRMD8Q9BZ67 464 aaPredicted RBP9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 HIPK3Q9H422 1215 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 NMUR1Q9HB89 426 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 PCDHB5Q9Y5E4 795 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 MICAL3Q7RTP6 2002 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 TANC1Q9C0D5 1861 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 FAM47DPA6NHR8 397 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 PITPNM1O00562 1244 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 SYN3O14994 580 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 OPHN1O60890 802 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 INHBAP08476 426 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 KRT4P19013 534 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 TPSB2P20231 275 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 SERPINB6P35237 376 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 FDFT1P37268 417 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 SLC11A1P49279 550 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 GLUD2P49448 558 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 SESN2P58004 480 aaPredicted RBP9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 CRADDP78560 199 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 SARNPP82979 210 aaKnown RBP9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 SEMA5AQ13591 1074 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 TPSAB1Q15661 275 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 SMAD1Q15797 465 aaKnown RBP9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 MGAT5BQ3V5L5 792 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 GKAP1Q5VSY0 366 aaPredicted RBP9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 PPM1NQ8N819 430 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 ZNF317Q96PQ6 595 aaPredicted RBP9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 ELAC1Q9H777 363 aaKnown RBP9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 PPCSQ9HAB8 311 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 PRDM16Q9HAZ2 1276 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 SLC27A5Q9Y2P5 690 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 RRP15Q9Y3B9 282 aaKnown RBP9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 ACTL7BQ9Y614 415 aa9.35□□□□□ -0.91
RAB3IP-218ENST00000553099 LAMA2P24043 3122 aaKnown RBP9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 TCP11X1B4DZS4 312 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 DFFAO00273 331 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 TRIM66O15016 1216 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 SPAG6O75602 509 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 DRD4P21917 467 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 CCR1P32246 355 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 USP46P62068 366 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 WASHC5Q12768 1159 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 SPARCL1Q14515 664 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 FUT10Q6P4F1 479 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 SCD5Q86SK9 330 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 SRLQ86TD4 932 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 PRPF39Q86UA1 669 aaKnown RBP9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 TMEM173Q86WV6 379 aaPredicted RBP9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 NUP93Q8N1F7 819 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 SCML4Q8N228 414 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 MCUQ8NE86 351 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 OSER1Q9NX31 292 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 MARCH5Q9NX47 278 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 TTLL3Q9Y4R7 772 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 FAM169AQ9Y6X4 670 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 PAGE1O75459 146 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 COL6A1P12109 1028 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 PTPN3P26045 913 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 CYP2C18P33260 490 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 MAGEA6P43360 314 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 OLIG2Q13516 323 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 NUGGCQ68CJ6 796 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 ADGRD1Q6QNK2 874 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 NPAS4Q8IUM7 802 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 CACNA2D3Q8IZS8 1091 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 DCAKDQ8WVC6 231 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 FUBP3Q96I24 572 aaKnown RBP eCLIP9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 CABS1Q96KC9 395 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 TGS1Q96RS0 853 aaKnown RBP9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 BEGAINQ9BUH8 593 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 SMOC2Q9H3U7 446 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 XAB2Q9HCS7 855 aaKnown RBP9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 PAK6Q9NQU5 681 aaPredicted RBP9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 FGFR1OP2Q9NVK5 253 aa9.34□□□□□ -0.91
RAB3IP-218ENST00000553099 SENP1Q9P0U3 644 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms