RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 CDRT15L2A8MXV6 281 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 NEDD8-MDP1E9PL57 170 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 CPLX1O14810 134 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 SIGLEC6O43699 453 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 VPS4BO75351 444 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 OLFM2O95897 454 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 DNTTP04053 509 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 EPHX1P07099 455 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 ADRB2P07550 413 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 ALPPL2P10696 532 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 CKMT1AP12532 417 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 EDN3P14138 238 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 ACO1P21399 889 aaKnown RBP5.45□□□□□ -1.54
CKAP4-203ENST00000553039 SCP2P22307 547 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 RPA1P27694 616 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 GRNP28799 593 aaKnown RBP5.45□□□□□ -1.54
CKAP4-203ENST00000553039 PLA2G4AP47712 749 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 LIG3P49916 1009 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 NOP14P78316 857 aaKnown RBP5.45□□□□□ -1.54
CKAP4-203ENST00000553039 TAF10Q12962 218 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 NNTQ13423 1086 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 ENPP2Q13822 863 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 TMEM132DQ14C87 1099 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 SHBQ15464 509 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 TTC31Q49AM3 519 aaPredicted RBP5.45□□□□□ -1.54
CKAP4-203ENST00000553039 SEZ6Q53EL9 994 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 C3orf38Q5JPI3 329 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 MANEAQ5SRI9 462 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 KIAA0895LQ68EN5 471 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 FOXR1Q6PIV2 292 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 TPGS1Q6ZTW0 290 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 PIK3AP1Q6ZUJ8 805 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 CLEC14AQ86T13 490 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 SLC34A3Q8N130 599 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 MAPK15Q8TD08 544 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 GANCQ8TET4 914 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 CPLX3Q8WVH0 158 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 OVCA2Q8WZ82 227 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 HSH2DQ96JZ2 352 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 MRGPRX2Q96LB1 330 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 TRIM56Q9BRZ2 755 aaKnown RBP5.45□□□□□ -1.54
CKAP4-203ENST00000553039 TRIM9Q9C026 710 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 CEP44Q9C0F1 390 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 ZNF768Q9H5H4 540 aaKnown RBP5.45□□□□□ -1.54
CKAP4-203ENST00000553039 RUBCNLQ9H714 662 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 POLD4Q9HCU8 107 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 ELOVL2Q9NXB9 296 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 DPP3Q9NY33 737 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 NCKIPSDQ9NZQ3 722 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 MARK1Q9P0L2 795 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 ARHGAP28Q9P2N2 729 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 TJP2Q9UDY2 1190 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 SUN2Q9UH99 717 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 LSM7Q9UK45 103 aaKnown RBP5.45□□□□□ -1.54
CKAP4-203ENST00000553039 SCML1Q9UN30 329 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 VPS4AQ9UN37 437 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 SLC27A6Q9Y2P4 619 aa5.45□□□□□ -1.54
CKAP4-203ENST00000553039 R3HCC1Q9Y3T6 440 aaKnown RBP5.45□□□□□ -1.54
CKAP4-203ENST00000553039 TNRC6BQ9UPQ9 1833 aaKnown RBP5.45□□□□□ -1.54
CKAP4-203ENST00000553039 PTPRDP23468 1912 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 PLXND1Q9Y4D7 1925 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 ITPR2Q14571 2701 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 TMEM238LA0A1B0GVL6 79 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 ABLIM1O14639 778 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 PPEF2O14830 753 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 TRIM24O15164 1050 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 OGTO15294 1046 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 RNASEH1O60930 286 aaKnown RBP5.44□□□□□ -1.54
CKAP4-203ENST00000553039 RTN3O95197 1032 aaPredicted RBP5.44□□□□□ -1.54
CKAP4-203ENST00000553039 OAS1P00973 400 aaKnown RBP5.44□□□□□ -1.54
CKAP4-203ENST00000553039 ITGA2BP08514 1039 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 OR52Z1P0C646 297 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 CES1P23141 567 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 YWHAQP27348 245 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 FBN2P35556 2912 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 GIPRP48546 466 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 CD97P48960 835 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 GUCY2FP51841 1108 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 COPAP53621 1224 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 GYS2P54840 703 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 RPS26P62854 115 aaKnown RBP5.44□□□□□ -1.54
CKAP4-203ENST00000553039 POU5F1Q01860 360 aaKnown RBP5.44□□□□□ -1.54
CKAP4-203ENST00000553039 CAMK2GQ13555 558 aaPredicted RBP5.44□□□□□ -1.54
CKAP4-203ENST00000553039 EIF4HQ15056 248 aaKnown RBP5.44□□□□□ -1.54
CKAP4-203ENST00000553039 TTC22Q5TAA0 569 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 SFMBT2Q5VUG0 894 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 JADE1Q6IE81 842 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 FAM171BQ6P995 826 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 BORAQ6PGQ7 559 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 SERPINA13PQ6UXR4 307 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 Q6ZUG5 572 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 USP30Q70CQ3 517 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 HEATR4Q86WZ0 1026 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 BBS7Q8IWZ6 715 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 MFSD2AQ8NA29 543 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 OR6P1Q8NGX9 317 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 WDR48Q8TAF3 677 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 CACTINQ8WUQ7 758 aaKnown RBP5.44□□□□□ -1.54
CKAP4-203ENST00000553039 BICD1Q96G01 975 aa5.44□□□□□ -1.54
CKAP4-203ENST00000553039 C8orf48Q96LL4 319 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms