RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 ALKBH5Q6P6C2 394 aaKnown RBP14.61□□□□□ -0.07
PTCH1-226ENST00000553011 C14orf80Q86SX3 495 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 MAML2Q8IZL2 1156 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-226ENST00000553011 SPEM1Q8N4L4 309 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 TC2NQ8N9U0 490 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 RPLP0P6Q8NHW5 317 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 WFDC5Q8TCV5 224 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 USP33Q8TEY7 942 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 FAM172AQ8WUF8 416 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 CENPIQ92674 756 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-226ENST00000553011 TRIM11Q96F44 468 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 IER2Q9BTL4 223 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 IRX2Q9BZI1 471 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-226ENST00000553011 SIK2Q9H0K1 926 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 ZDHHC4Q9NPG8 344 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 PARVAQ9NVD7 372 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 MYO1AQ9UBC5 1043 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 HCN2Q9UL51 889 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 HS3ST4Q9Y661 456 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 SDK1Q7Z5N4 2213 aa14.61□□□□□ -0.07
PTCH1-226ENST00000553011 EML5Q05BV3 1969 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 SSU72P8A0A1W2PR75 194 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 ANKRD62A6NC57 917 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 F5H5T6 163 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 LAMTOR5O43504 91 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 MYBL1P10243 752 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 HOXC13P31276 330 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 TIE1P35590 1138 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 TNFRSF4P43489 277 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 KIR2DL1P43626 348 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-226ENST00000553011 SATB1Q01826 763 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 AUHQ13825 339 aaKnown RBP14.6□□□□□ -0.07
PTCH1-226ENST00000553011 SLC18A3Q16572 532 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 GEN1Q17RS7 908 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 PREPLQ4J6C6 727 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-226ENST00000553011 RNF43Q68DV7 783 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 FBXL22Q6P050 247 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 STRADAQ7RTN6 431 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 CIR1Q86X95 450 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-226ENST00000553011 SLC2A11Q9BYW1 496 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 TRIM7Q9C029 511 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 THAP2Q9H0W7 228 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 DEF6Q9H4E7 631 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 VANGL2Q9ULK5 521 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 SLC27A6Q9Y2P4 619 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 PAXBP1Q9Y5B6 917 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 SPAG17Q6Q759 2223 aa14.6□□□□□ -0.07
PTCH1-226ENST00000553011 TYW5A2RUC4 315 aaKnown RBP14.59□□□□□ -0.07
PTCH1-226ENST00000553011 TMEM191CA6NGB0 347 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 CHURC1-FNTBB4DL54 471 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 H0Y858 1186 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 AKR1B10O60218 316 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 HLA-FP30511 346 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 CXCL12P48061 93 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 IRAK1P51617 712 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 CCR3P51677 355 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 GALCP54803 685 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 ZNF252P-AS1Q0IIN9 211 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 MTA1Q13330 715 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 MPP7Q5T2T1 576 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 TSSK4Q6SA08 328 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 MAMSTRQ6ZN01 415 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 ANKS1BQ7Z6G8 1248 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 MFN1Q8IWA4 741 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 CARNMT1Q8N4J0 409 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 CCDC33Q8N5R6 958 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 ALLCQ8N6M5 410 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 CCDC185Q8N715 623 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 IGSF8Q969P0 613 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 ARHGEF26Q96DR7 871 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 RPRD1AQ96P16 312 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-226ENST00000553011 PRRX2Q99811 253 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 CNPY3Q9BT09 278 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 PACSIN1Q9BY11 444 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 NHEJ1Q9H9Q4 299 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-226ENST00000553011 PRMT8Q9NR22 394 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-226ENST00000553011 ABCB8Q9NUT2 735 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 SPTLC3Q9NUV7 552 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 TMEM51Q9NW97 253 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 SCINQ9Y6U3 715 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 CKAP5Q14008 2032 aa14.59□□□□□ -0.07
PTCH1-226ENST00000553011 NUP205Q92621 2012 aa14.58□□□□□ -0.08
PTCH1-226ENST00000553011 ATG13O75143 517 aa14.58□□□□□ -0.08
PTCH1-226ENST00000553011 LUC7L3O95232 432 aaKnown RBP14.58□□□□□ -0.08
PTCH1-226ENST00000553011 KLF8O95600 359 aaPredicted RBP14.58□□□□□ -0.08
PTCH1-226ENST00000553011 PSMA2P25787 234 aa14.58□□□□□ -0.08
PTCH1-226ENST00000553011 CD70P32970 193 aa14.58□□□□□ -0.08
PTCH1-226ENST00000553011 MRPS21P82921 87 aaKnown RBP14.58□□□□□ -0.08
PTCH1-226ENST00000553011 CSTF1Q05048 431 aaKnown RBP14.58□□□□□ -0.08
PTCH1-226ENST00000553011 RABGAP1LQ5R372 815 aa14.58□□□□□ -0.08
PTCH1-226ENST00000553011 EGFLAMQ63HQ2 1017 aa14.58□□□□□ -0.08
PTCH1-226ENST00000553011 TMEM215Q68D42 235 aa14.58□□□□□ -0.08
PTCH1-226ENST00000553011 NUDT18Q6ZVK8 323 aa14.58□□□□□ -0.08
PTCH1-226ENST00000553011 ZNF513Q8N8E2 541 aaPredicted RBP14.58□□□□□ -0.08
PTCH1-226ENST00000553011 IL17RCQ8NAC3 791 aa14.58□□□□□ -0.08
PTCH1-226ENST00000553011 CCDC26Q8TAB7 109 aa14.58□□□□□ -0.08
PTCH1-226ENST00000553011 CCDC42Q96M95 316 aa14.58□□□□□ -0.08
PTCH1-226ENST00000553011 MAGEB5Q9BZ81 275 aa14.58□□□□□ -0.08
PTCH1-226ENST00000553011 KCNH6Q9H252 994 aa14.58□□□□□ -0.08
PTCH1-226ENST00000553011 CHD5Q8TDI0 1954 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms