RNA–Protein interactions for RNA: ENST00000552329.1

CHPT1-209, Transcript of choline phosphotransferase 1, humanhuman

TSL 4

Gene CHPT1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-209ENST00000552329 TMF1P82094 1093 aa7.07□□□□□ -1.28
CHPT1-209ENST00000552329 CCDC15Q0P6D6 951 aa7.07□□□□□ -1.28
CHPT1-209ENST00000552329 LARS2Q15031 903 aaKnown RBP7.07□□□□□ -1.28
CHPT1-209ENST00000552329 MPEG1Q2M385 716 aa7.07□□□□□ -1.28
CHPT1-209ENST00000552329 ZNF772Q68DY9 489 aaPredicted RBP7.07□□□□□ -1.28
CHPT1-209ENST00000552329 RANBP10Q6VN20 620 aa7.07□□□□□ -1.28
CHPT1-209ENST00000552329 BRI3BPQ8WY22 251 aa7.07□□□□□ -1.28
CHPT1-209ENST00000552329 SGCZQ96LD1 299 aa7.07□□□□□ -1.28
CHPT1-209ENST00000552329 RNF7Q9UBF6 113 aa7.07□□□□□ -1.28
CHPT1-209ENST00000552329 TNS3Q68CZ2 1445 aa7.07□□□□□ -1.28
CHPT1-209ENST00000552329 ADAMTS3O15072 1205 aa7.06□□□□□ -1.28
CHPT1-209ENST00000552329 PLIN1O60240 522 aa7.06□□□□□ -1.28
CHPT1-209ENST00000552329 TUBB4AP04350 444 aa7.06□□□□□ -1.28
CHPT1-209ENST00000552329 HSPA5P11021 654 aaKnown RBP7.06□□□□□ -1.28
CHPT1-209ENST00000552329 ALADP13716 330 aa7.06□□□□□ -1.28
CHPT1-209ENST00000552329 ATF7P17544 494 aaPredicted RBP7.06□□□□□ -1.28
CHPT1-209ENST00000552329 EGR1P18146 543 aa7.06□□□□□ -1.28
CHPT1-209ENST00000552329 CERS1P27544 350 aa7.06□□□□□ -1.28
CHPT1-209ENST00000552329 CFHR3Q02985 330 aa7.06□□□□□ -1.28
CHPT1-209ENST00000552329 KPNB1Q14974 876 aaKnown RBP7.06□□□□□ -1.28
CHPT1-209ENST00000552329 C16orf71Q8IYS4 520 aaPredicted RBP7.06□□□□□ -1.28
CHPT1-209ENST00000552329 GDF15Q99988 308 aa7.06□□□□□ -1.28
CHPT1-209ENST00000552329 CINPQ9BW66 212 aaPredicted RBP7.06□□□□□ -1.28
CHPT1-209ENST00000552329 NRIP3Q9NQ35 241 aa7.06□□□□□ -1.28
CHPT1-209ENST00000552329 ARHGEF10O15013 1369 aa7.06□□□□□ -1.28
CHPT1-209ENST00000552329 KTN1Q86UP2 1357 aaKnown RBP7.06□□□□□ -1.28
CHPT1-209ENST00000552329 BTBD19C9JJ37 291 aa7.05□□□□□ -1.28
CHPT1-209ENST00000552329 CBFA2T3O75081 653 aa7.05□□□□□ -1.28
CHPT1-209ENST00000552329 VIPP01282 170 aa7.05□□□□□ -1.28
CHPT1-209ENST00000552329 YPEL5P62699 121 aa7.05□□□□□ -1.28
CHPT1-209ENST00000552329 SLC5A9Q2M3M2 681 aa7.05□□□□□ -1.28
CHPT1-209ENST00000552329 NEK8Q86SG6 692 aa7.05□□□□□ -1.28
CHPT1-209ENST00000552329 OSR1Q8TAX0 266 aaPredicted RBP7.05□□□□□ -1.28
CHPT1-209ENST00000552329 MUL1Q969V5 352 aa7.05□□□□□ -1.28
CHPT1-209ENST00000552329 ZC3H10Q96K80 434 aaKnown RBP7.05□□□□□ -1.28
CHPT1-209ENST00000552329 WDR24Q96S15 920 aa7.05□□□□□ -1.28
CHPT1-209ENST00000552329 ELAC2Q9BQ52 826 aaKnown RBP7.05□□□□□ -1.28
CHPT1-209ENST00000552329 ADGRE3Q9BY15 652 aa7.05□□□□□ -1.28
CHPT1-209ENST00000552329 SLC39A10Q9ULF5 831 aa7.05□□□□□ -1.28
CHPT1-209ENST00000552329 SBNO1A3KN83 1393 aa7.05□□□□□ -1.28
CHPT1-209ENST00000552329 J3KTA2 159 aa7.04□□□□□ -1.28
CHPT1-209ENST00000552329 RNF8O76064 485 aa7.04□□□□□ -1.28
CHPT1-209ENST00000552329 MBPP02686 304 aaPredicted RBP7.04□□□□□ -1.28
CHPT1-209ENST00000552329 SFPQP23246 707 aaKnown RBP eCLIP7.04□□□□□ -1.28
CHPT1-209ENST00000552329 SERPINB3P29508 390 aa7.04□□□□□ -1.28
CHPT1-209ENST00000552329 GSTM5P46439 218 aa7.04□□□□□ -1.28
CHPT1-209ENST00000552329 DNASE1L3Q13609 305 aa7.04□□□□□ -1.28
CHPT1-209ENST00000552329 ATP1A4Q13733 1029 aa7.04□□□□□ -1.28
CHPT1-209ENST00000552329 MAPKAPK3Q16644 382 aa7.04□□□□□ -1.28
CHPT1-209ENST00000552329 USP17L6PQ6QN14 398 aa7.04□□□□□ -1.28
CHPT1-209ENST00000552329 VSTM1Q6UX27 236 aa7.04□□□□□ -1.28
CHPT1-209ENST00000552329 GALNT16Q8N428 558 aa7.04□□□□□ -1.28
CHPT1-209ENST00000552329 ACRBPQ8NEB7 543 aa7.04□□□□□ -1.28
CHPT1-209ENST00000552329 PNISRQ8TF01 805 aaKnown RBP7.04□□□□□ -1.28
CHPT1-209ENST00000552329 KAZALD1Q96I82 304 aa7.04□□□□□ -1.28
CHPT1-209ENST00000552329 TESK2Q96S53 571 aa7.04□□□□□ -1.28
CHPT1-209ENST00000552329 EIF3CQ99613 913 aaKnown RBP7.04□□□□□ -1.28
CHPT1-209ENST00000552329 TERF2IPQ9NYB0 399 aa7.04□□□□□ -1.28
CHPT1-209ENST00000552329 FZD4Q9ULV1 537 aa7.04□□□□□ -1.28
CHPT1-209ENST00000552329 SCAF8Q9UPN6 1271 aaKnown RBP7.04□□□□□ -1.28
CHPT1-209ENST00000552329 TOPAZ1Q8N9V7 1692 aa7.03□□□□□ -1.28
CHPT1-209ENST00000552329 PIP5K1BO14986 540 aa7.03□□□□□ -1.28
CHPT1-209ENST00000552329 JAK3P52333 1124 aa7.03□□□□□ -1.28
CHPT1-209ENST00000552329 WDR5P61964 334 aaKnown RBP7.03□□□□□ -1.28
CHPT1-209ENST00000552329 SEMA3BQ13214 749 aa7.03□□□□□ -1.28
CHPT1-209ENST00000552329 KLF9Q13886 244 aaPredicted RBP7.03□□□□□ -1.28
CHPT1-209ENST00000552329 ELF2Q15723 593 aa7.03□□□□□ -1.28
CHPT1-209ENST00000552329 RAB30Q15771 203 aa7.03□□□□□ -1.28
CHPT1-209ENST00000552329 RASGRP3Q8IV61 690 aa7.03□□□□□ -1.28
CHPT1-209ENST00000552329 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.03□□□□□ -1.28
CHPT1-209ENST00000552329 DEPTORQ8TB45 409 aa7.03□□□□□ -1.28
CHPT1-209ENST00000552329 ZNF778Q96MU6 729 aa7.03□□□□□ -1.28
CHPT1-209ENST00000552329 NLRC4Q9NPP4 1024 aa7.03□□□□□ -1.28
CHPT1-209ENST00000552329 FSCN3Q9NQT6 498 aa7.03□□□□□ -1.28
CHPT1-209ENST00000552329 HEMK1Q9Y5R4 338 aaPredicted RBP7.03□□□□□ -1.28
CHPT1-209ENST00000552329 TRPM3Q9HCF6 1732 aaPredicted RBP7.03□□□□□ -1.28
CHPT1-209ENST00000552329 MARF1Q9Y4F3 1742 aaKnown RBP7.03□□□□□ -1.28
CHPT1-209ENST00000552329 TTC21BQ7Z4L5 1316 aa7.02□□□□□ -1.28
CHPT1-209ENST00000552329 COL22A1Q8NFW1 1626 aaPredicted RBP7.02□□□□□ -1.29
CHPT1-209ENST00000552329 H3BNC9 293 aa7.02□□□□□ -1.29
CHPT1-209ENST00000552329 ADAM10O14672 748 aa7.02□□□□□ -1.29
CHPT1-209ENST00000552329 DSCR3O14972 297 aa7.02□□□□□ -1.29
CHPT1-209ENST00000552329 LMO1P25800 156 aa7.02□□□□□ -1.29
CHPT1-209ENST00000552329 SLC5A2P31639 672 aa7.02□□□□□ -1.29
CHPT1-209ENST00000552329 VPS41P49754 854 aa7.02□□□□□ -1.29
CHPT1-209ENST00000552329 ZNF81P51508 661 aa7.02□□□□□ -1.29
CHPT1-209ENST00000552329 RBM6P78332 1123 aaKnown RBP7.02□□□□□ -1.29
CHPT1-209ENST00000552329 NSUN2Q08J23 767 aaKnown RBP eCLIP7.02□□□□□ -1.29
CHPT1-209ENST00000552329 KCNJ12Q14500 433 aa7.02□□□□□ -1.29
CHPT1-209ENST00000552329 ETFDHQ16134 617 aa7.02□□□□□ -1.29
CHPT1-209ENST00000552329 KIAA1614Q5VZ46 1190 aa7.02□□□□□ -1.29
CHPT1-209ENST00000552329 UNC5CLQ8IV45 518 aa7.02□□□□□ -1.29
CHPT1-209ENST00000552329 SYTL1Q8IYJ3 562 aa7.02□□□□□ -1.29
CHPT1-209ENST00000552329 SVIPQ8NHG7 77 aa7.02□□□□□ -1.29
CHPT1-209ENST00000552329 MAP4K1Q92918 833 aa7.02□□□□□ -1.29
CHPT1-209ENST00000552329 EIF2AQ9BY44 585 aaKnown RBP7.02□□□□□ -1.29
CHPT1-209ENST00000552329 ARL8BQ9NVJ2 186 aa7.02□□□□□ -1.29
CHPT1-209ENST00000552329 IGSF9Q9P2J2 1179 aa7.02□□□□□ -1.29
CHPT1-209ENST00000552329 TRPC5Q9UL62 973 aaPredicted RBP7.02□□□□□ -1.29
CHPT1-209ENST00000552329 POLR3AO14802 1390 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms