RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 PTPN3P26045 913 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 PSMB4P28070 264 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 CYP2C18P33260 490 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 GRIA1P42261 906 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 MSH2P43246 934 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 WDR4P57081 412 aaKnown RBP11.85□□□□□ -0.51
RAB5C-208ENST00000551338 HTRA3P83110 453 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 GALNT2Q10471 571 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 MRPL58Q14197 206 aaKnown RBP11.85□□□□□ -0.51
RAB5C-208ENST00000551338 NFE2Q16621 373 aaPredicted RBP11.85□□□□□ -0.51
RAB5C-208ENST00000551338 KBTBD12Q3ZCT8 623 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 BRMS1LQ5PSV4 323 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 MANEALQ5VSG8 457 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 SDHAF4Q5VUM1 108 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 ZNF280DQ6N043 979 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 PDZD4Q76G19 769 aaPredicted RBP11.85□□□□□ -0.51
RAB5C-208ENST00000551338 PRPF39Q86UA1 669 aaKnown RBP11.85□□□□□ -0.51
RAB5C-208ENST00000551338 TTC9BQ8N6N2 239 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 DENND1AQ8TEH3 1009 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 DEPDC1BQ8WUY9 529 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 SLC44A1Q8WWI5 657 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 SEPT8Q92599 483 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 CASP10Q92851 521 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 APBB2Q92870 758 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 HDAC11Q96DB2 347 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 C8orf48Q96LL4 319 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 CYTH2Q99418 400 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 GORASP1Q9BQQ3 440 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 CEP41Q9BYV8 373 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 OSBPL2Q9H1P3 480 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 XAB2Q9HCS7 855 aaKnown RBP11.85□□□□□ -0.51
RAB5C-208ENST00000551338 PAK6Q9NQU5 681 aaPredicted RBP11.85□□□□□ -0.51
RAB5C-208ENST00000551338 SEPT10Q9P0V9 454 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 IGSF9Q9P2J2 1179 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 GGA2Q9UJY4 613 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 PCDHB7Q9Y5E2 793 aa11.85□□□□□ -0.51
RAB5C-208ENST00000551338 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.84□□□□□ -0.51
RAB5C-208ENST00000551338 FAM47DPA6NHR8 397 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 TRIM66O15016 1216 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 MSI1O43347 362 aaKnown RBP11.84□□□□□ -0.51
RAB5C-208ENST00000551338 TYROBPO43914 113 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 ZNF189O75820 626 aaPredicted RBP11.84□□□□□ -0.51
RAB5C-208ENST00000551338 CPP00450 1065 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 GSTA2P09210 222 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 MLNP12872 115 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 HOXC13P31276 330 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 STX2P32856 288 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 MAGEA11P43364 429 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 SLC18A1P54219 525 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 MTFR1Q15390 333 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 PARP6Q2NL67 630 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 CTXN3Q4LDR2 81 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 FAM171A1Q5VUB5 890 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 STEAP4Q687X5 459 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 MSANTD2Q6P1R3 559 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 FUT10Q6P4F1 479 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 C6orf89Q6UWU4 347 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 UNC5AQ6ZN44 842 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 SPATS2Q86XZ4 545 aaKnown RBP11.84□□□□□ -0.51
RAB5C-208ENST00000551338 NPAS4Q8IUM7 802 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 ABI1Q8IZP0 508 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 C4orf33Q8N1A6 199 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 CRIPAKQ8N1N5 446 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 CCNYQ8ND76 341 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 GDAP1Q8TB36 358 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 DYDC1Q8WWB3 177 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 DPF3Q92784 378 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 SGSM3Q96HU1 749 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 SEC16BQ96JE7 1060 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 EBNA1BP2Q99848 306 aaKnown RBP11.84□□□□□ -0.51
RAB5C-208ENST00000551338 GPR62Q9BZJ7 368 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 SSU72Q9NP77 194 aaKnown RBP11.84□□□□□ -0.51
RAB5C-208ENST00000551338 SMYD2Q9NRG4 433 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 OSER1Q9NX31 292 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 NKIRAS1Q9NYS0 192 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 ZC3H7BQ9UGR2 993 aaKnown RBP11.84□□□□□ -0.51
RAB5C-208ENST00000551338 SFMBT1Q9UHJ3 866 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 OGDHLQ9ULD0 1010 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 SMG5Q9UPR3 1016 aaKnown RBP11.84□□□□□ -0.51
RAB5C-208ENST00000551338 SCML2Q9UQR0 700 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 PCDHB5Q9Y5E4 795 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 FAM169AQ9Y6X4 670 aa11.84□□□□□ -0.51
RAB5C-208ENST00000551338 MTMR11A4FU01 709 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 OR6C75A6NL08 312 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 KCNK1O00180 336 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 NCAM2O15394 837 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 PAGE1O75459 146 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 VNN2O95498 520 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 ASMTLO95671 621 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 APOEP02649 317 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 PRKCHP24723 683 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 EPHB2P29323 1055 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 FOXN2P32314 431 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 SERPINB6P35237 376 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 USP46P62068 366 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 CDK16Q00536 496 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 ZBTB17Q13105 803 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 PPP2R5DQ14738 602 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 LRRC8BQ6P9F7 803 aa11.83□□□□□ -0.52
RAB5C-208ENST00000551338 CPLX4Q7Z7G2 160 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms