RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 KCNK3O14649 394 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 PTGESO14684 152 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 GSTA4O15217 222 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 P4HA2O15460 535 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 B4GALT3O60512 393 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 N4BP1O75113 896 aaKnown RBP6.16□□□□□ -1.42
SCAF11-213ENST00000550629 OFD1O75665 1012 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 GJB5O95377 273 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 IL18BPO95998 194 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 THP07101 528 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 TPM2P07951 284 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 ATP2A2P16615 1042 aaKnown RBP6.16□□□□□ -1.42
SCAF11-213ENST00000550629 AKAP5P24588 427 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 RPL9P32969 192 aaKnown RBP6.16□□□□□ -1.42
SCAF11-213ENST00000550629 MLH1P40692 756 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 TNFSF9P41273 254 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 CASP4P49662 377 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 OSTNP61366 133 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 CETN1Q12798 172 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 KCNJ12Q14500 433 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 BMS1Q14692 1282 aaKnown RBP6.16□□□□□ -1.42
SCAF11-213ENST00000550629 TMEM132DQ14C87 1099 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 SMAD2Q15796 467 aaKnown RBP6.16□□□□□ -1.42
SCAF11-213ENST00000550629 CRY1Q16526 586 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 CCDC40Q4G0X9 1142 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 FIGNQ5HY92 759 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 CLLU1OSQ5K130 101 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.16□□□□□ -1.424e-6■■■■□ 20.5
SCAF11-213ENST00000550629 LUZP1Q86V48 1076 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 CMTR2Q8IYT2 770 aaKnown RBP6.16□□□□□ -1.42
SCAF11-213ENST00000550629 LRRC43Q8N309 656 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 STPG3Q8N7X2 389 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 RNF169Q8NCN4 708 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 SLC35C1Q96A29 364 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 CCDC127Q96BQ5 260 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 ZNF689Q96CS4 500 aaPredicted RBP6.16□□□□□ -1.42
SCAF11-213ENST00000550629 CNOT6LQ96LI5 555 aaKnown RBP6.16□□□□□ -1.42
SCAF11-213ENST00000550629 RNPC3Q96LT9 517 aaKnown RBP6.16□□□□□ -1.42
SCAF11-213ENST00000550629 MAGEB10Q96LZ2 347 aaPredicted RBP6.16□□□□□ -1.42
SCAF11-213ENST00000550629 PPP1R10Q96QC0 940 aaKnown RBP6.16□□□□□ -1.42
SCAF11-213ENST00000550629 FNBP1Q96RU3 617 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 RPS6KC1Q96S38 1066 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 GAD1Q99259 594 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 RAD9AQ99638 391 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 CGRRF1Q99675 332 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 HSD3B7Q9H2F3 369 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 PRO3102Q9H379 93 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 SMURF1Q9HCE7 757 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 PDE11AQ9HCR9 933 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 ARHGAP20Q9P2F6 1191 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 STK39Q9UEW8 545 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 LIMA1Q9UHB6 759 aaKnown RBP6.16□□□□□ -1.42
SCAF11-213ENST00000550629 ITGA11Q9UKX5 1188 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 UBQLN1Q9UMX0 589 aaKnown RBP6.16□□□□□ -1.42
SCAF11-213ENST00000550629 INSL6Q9Y581 213 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.16□□□□□ -1.42
SCAF11-213ENST00000550629 ATP23Q9Y6H3 246 aa6.16□□□□□ -1.42
SCAF11-213ENST00000550629 CCDC163A0A0D9SF12 145 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 LRRIQ3A6PVS8 624 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-213ENST00000550629 KLHL18O94889 574 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 FBXO21O94952 628 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 KNG1P01042 644 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 TNNC2P02585 160 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 AFPP02771 609 aaKnown RBP6.15□□□□□ -1.42
SCAF11-213ENST00000550629 ITGB3P05106 788 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 DLATP10515 647 aaKnown RBP6.15□□□□□ -1.42
SCAF11-213ENST00000550629 TNNI1P19237 187 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 CDK11BP21127 795 aaKnown RBP6.15□□□□□ -1.42
SCAF11-213ENST00000550629 LRPAP1P30533 357 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 PNPLA4P41247 253 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 DEFB103AP81534 67 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 RNASELQ05823 741 aaKnown RBP6.15□□□□□ -1.42
SCAF11-213ENST00000550629 DSC1Q08554 894 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 DBPQ10586 325 aaPredicted RBP6.15□□□□□ -1.42
SCAF11-213ENST00000550629 NFATC3Q12968 1075 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 SHHQ15465 462 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 NAB2Q15742 525 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 MAN2A1Q16706 1144 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 ZACNQ401N2 412 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 C9orf50Q5SZB4 431 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 C1orf220Q5T0J3 134 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 JADE1Q6IE81 842 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 C15orf39Q6ZRI6 1047 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 EP400NLQ6ZTU2 488 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 TDHQ8IZJ6 230 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 CISD2Q8N5K1 135 aaKnown RBP6.15□□□□□ -1.42
SCAF11-213ENST00000550629 LRRC52Q8N7C0 313 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 NUDT10Q8NFP7 164 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 BEST2Q8NFU1 509 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 TAF4BQ92750 862 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 LPPQ93052 612 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 EEF2KMTQ96G04 330 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 NUDT11Q96G61 164 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 FAXDC2Q96IV6 333 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 ANKRD36BP1Q96IX9 119 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 ZMAT2Q96NC0 199 aaKnown RBP6.15□□□□□ -1.42
SCAF11-213ENST00000550629 CASD1Q96PB1 797 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 RBM15Q96T37 977 aaKnown RBP eCLIP6.15□□□□□ -1.42
SCAF11-213ENST00000550629 YME1L1Q96TA2 773 aa6.15□□□□□ -1.42
SCAF11-213ENST00000550629 TMEM175Q9BSA9 504 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms