RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 GOLGA6L7A0A1B0GV03 622 aa22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 RNF225M0QZC1 329 aaPredicted RBP22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 IRAK2O43187 625 aa22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 ACSL4O60488 711 aa22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 LTFP02788 710 aa22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 SLC6A4P31645 630 aa22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 CD70P32970 193 aa22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 SLC11A2P49281 568 aa22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 CSNK1EP49674 416 aaKnown RBP22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 AFF3P51826 1226 aaKnown RBP22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 NUMA1Q14980 2115 aa22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 STILQ15468 1287 aa22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 PROSER1Q86XN7 944 aa22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 SETD7Q8WTS6 366 aaKnown RBP22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 SNX19Q92543 992 aa22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 SMARCE1Q969G3 411 aa22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 LMLNQ96KR4 655 aa22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 HSFY1Q96LI6 401 aa22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 NT5C1BQ96P26 610 aa22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 BTBD1Q9H0C5 482 aa22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 KIAA1522Q9P206 1035 aaPredicted RBP22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 PCDHB4Q9Y5E5 795 aa22.56■■□□□ 1.2
SMARCC2-210ENST00000550519 ATRXP46100 2492 aa22.55■■□□□ 1.2
SMARCC2-210ENST00000550519 PIK3R2O00459 728 aa22.55■■□□□ 1.2
SMARCC2-210ENST00000550519 TBL1XO60907 577 aa22.55■■□□□ 1.2
SMARCC2-210ENST00000550519 SEMA4FO95754 770 aa22.55■■□□□ 1.2
SMARCC2-210ENST00000550519 POLR2EP19388 210 aaKnown RBP22.55■■□□□ 1.2
SMARCC2-210ENST00000550519 SCAPQ12770 1279 aa22.55■■□□□ 1.2
SMARCC2-210ENST00000550519 CCNI2Q6ZMN8 369 aaPredicted RBP22.55■■□□□ 1.2
SMARCC2-210ENST00000550519 ZNF557Q8N988 423 aaPredicted RBP22.55■■□□□ 1.2
SMARCC2-210ENST00000550519 LMO3Q8TAP4 145 aa22.55■■□□□ 1.2
SMARCC2-210ENST00000550519 CLEC4CQ8WTT0 213 aa22.55■■□□□ 1.2
SMARCC2-210ENST00000550519 KAT5Q92993 513 aa22.55■■□□□ 1.2
SMARCC2-210ENST00000550519 MYO19Q96H55 970 aa22.55■■□□□ 1.2
SMARCC2-210ENST00000550519 CEP63Q96MT8 703 aa22.55■■□□□ 1.2
SMARCC2-210ENST00000550519 SUN2Q9UH99 717 aa22.55■■□□□ 1.2
SMARCC2-210ENST00000550519 M0QYV0 167 aa22.54■■□□□ 1.2
SMARCC2-210ENST00000550519 FLRT2O43155 660 aa22.54■■□□□ 1.2
SMARCC2-210ENST00000550519 DNTTP04053 509 aa22.54■■□□□ 1.2
SMARCC2-210ENST00000550519 BRD2P25440 801 aaKnown RBP22.54■■□□□ 1.2
SMARCC2-210ENST00000550519 TBX4P57082 545 aa22.54■■□□□ 1.2
SMARCC2-210ENST00000550519 KIF19Q2TAC6 998 aa22.54■■□□□ 1.2
SMARCC2-210ENST00000550519 NADSYN1Q6IA69 706 aa22.54■■□□□ 1.2
SMARCC2-210ENST00000550519 PPM1KQ8N3J5 372 aa22.54■■□□□ 1.2
SMARCC2-210ENST00000550519 FIBINQ8TAL6 211 aa22.54■■□□□ 1.2
SMARCC2-210ENST00000550519 GOLGA1Q92805 767 aa22.54■■□□□ 1.2
SMARCC2-210ENST00000550519 TTC17Q96AE7 1141 aa22.54■■□□□ 1.2
SMARCC2-210ENST00000550519 BIRC7Q96CA5 298 aa22.54■■□□□ 1.2
SMARCC2-210ENST00000550519 TM9SF3Q9HD45 589 aa22.54■■□□□ 1.2
SMARCC2-210ENST00000550519 PSMA7O14818 248 aa22.53■■□□□ 1.2
SMARCC2-210ENST00000550519 FBXO21O94952 628 aa22.53■■□□□ 1.2
SMARCC2-210ENST00000550519 FYNP06241 537 aa22.53■■□□□ 1.2
SMARCC2-210ENST00000550519 GRIA4P48058 902 aa22.53■■□□□ 1.2
SMARCC2-210ENST00000550519 TEAD4Q15561 434 aa22.53■■□□□ 1.2
SMARCC2-210ENST00000550519 ZNF776Q68DI1 518 aaPredicted RBP22.53■■□□□ 1.2
SMARCC2-210ENST00000550519 LRSAM1Q6UWE0 723 aa22.53■■□□□ 1.2
SMARCC2-210ENST00000550519 MFN1Q8IWA4 741 aa22.53■■□□□ 1.2
SMARCC2-210ENST00000550519 DHTKD1Q96HY7 919 aaPredicted RBP22.53■■□□□ 1.2
SMARCC2-210ENST00000550519 PRICKLE1Q96MT3 831 aaPredicted RBP22.53■■□□□ 1.2
SMARCC2-210ENST00000550519 TIGD1Q96MW7 591 aa22.53■■□□□ 1.2
SMARCC2-210ENST00000550519 SGK2Q9HBY8 427 aa22.53■■□□□ 1.2
SMARCC2-210ENST00000550519 TOR4AQ9NXH8 423 aa22.53■■□□□ 1.2
SMARCC2-210ENST00000550519 ANKRD6Q9Y2G4 727 aa22.53■■□□□ 1.2
SMARCC2-210ENST00000550519 SNX11Q9Y5W9 270 aa22.53■■□□□ 1.2
SMARCC2-210ENST00000550519 CABIN1Q9Y6J0 2220 aa22.53■■□□□ 1.2
SMARCC2-210ENST00000550519 GOLGA6L4A6NEF3 574 aa22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 P4HA2O15460 535 aa22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 DKK1O94907 266 aa22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 CALCAP01258 141 aa22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 CD44P16070 742 aaKnown RBP22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 CD27P26842 260 aa22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 RPL34P49207 117 aaKnown RBP22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 TTC31Q49AM3 519 aaPredicted RBP22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 HJURPQ8NCD3 748 aaPredicted RBP22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 RHBDD1Q8TEB9 315 aa22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 MYEOVQ96EZ4 313 aa22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 FCRL2Q96LA5 508 aaPredicted RBP22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 CDC6Q99741 560 aa22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 ORAI3Q9BRQ5 295 aa22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 RSPH9Q9H1X1 276 aaPredicted RBP22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 MTG2Q9H4K7 406 aa22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 STIM2Q9P246 746 aa22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 INTS6Q9UL03 887 aaKnown RBP22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 LHX6Q9UPM6 363 aa22.52■■□□□ 1.2
SMARCC2-210ENST00000550519 RPS24P62847 133 aaKnown RBP22.51■■□□□ 1.19
SMARCC2-210ENST00000550519 GCNT1Q02742 428 aa22.51■■□□□ 1.19
SMARCC2-210ENST00000550519 NNTQ13423 1086 aa22.51■■□□□ 1.19
SMARCC2-210ENST00000550519 STIM1Q13586 685 aa22.51■■□□□ 1.19
SMARCC2-210ENST00000550519 SUZ12Q15022 739 aaKnown RBP22.51■■□□□ 1.19
SMARCC2-210ENST00000550519 CCDC40Q4G0X9 1142 aa22.51■■□□□ 1.19
SMARCC2-210ENST00000550519 USP30Q70CQ3 517 aa22.51■■□□□ 1.19
SMARCC2-210ENST00000550519 DQX1Q8TE96 717 aaKnown RBP22.51■■□□□ 1.19
SMARCC2-210ENST00000550519 SLC39A13Q96H72 371 aa22.51■■□□□ 1.19
SMARCC2-210ENST00000550519 MRGPRX3Q96LB0 322 aa22.51■■□□□ 1.19
SMARCC2-210ENST00000550519 SERPINB11Q96P15 392 aa22.51■■□□□ 1.19
SMARCC2-210ENST00000550519 DDX50Q9BQ39 737 aaKnown RBP22.51■■□□□ 1.19
SMARCC2-210ENST00000550519 MIS12Q9H081 205 aa22.51■■□□□ 1.19
SMARCC2-210ENST00000550519 HOOK1Q9UJC3 728 aaKnown RBP22.51■■□□□ 1.19
SMARCC2-210ENST00000550519 SCML1Q9UN30 329 aa22.51■■□□□ 1.19
SMARCC2-210ENST00000550519 TLR6Q9Y2C9 796 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms