RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 PPM1KQ8N3J5 372 aa11.29□□□□□ -0.6
PFDN5-210ENST00000550513 ZNF557Q8N988 423 aaPredicted RBP11.29□□□□□ -0.6
PFDN5-210ENST00000550513 BAHD1Q8TBE0 780 aaPredicted RBP11.29□□□□□ -0.6
PFDN5-210ENST00000550513 WFDC5Q8TCV5 224 aa11.29□□□□□ -0.6
PFDN5-210ENST00000550513 CLEC4CQ8WTT0 213 aa11.29□□□□□ -0.6
PFDN5-210ENST00000550513 IRGQQ8WZA9 623 aa11.29□□□□□ -0.6
PFDN5-210ENST00000550513 SMARCE1Q969G3 411 aa11.29□□□□□ -0.6
PFDN5-210ENST00000550513 NT5C1BQ96P26 610 aa11.29□□□□□ -0.6
PFDN5-210ENST00000550513 IRX2Q9BZI1 471 aaPredicted RBP11.29□□□□□ -0.6
PFDN5-210ENST00000550513 BTBD1Q9H0C5 482 aa11.29□□□□□ -0.6
PFDN5-210ENST00000550513 KIAA1257Q9ULG3 409 aa11.29□□□□□ -0.6
PFDN5-210ENST00000550513 LHX6Q9UPM6 363 aa11.29□□□□□ -0.6
PFDN5-210ENST00000550513 PCDHB4Q9Y5E5 795 aa11.29□□□□□ -0.6
PFDN5-210ENST00000550513 GOLGA6L4A6NEF3 574 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 PSMA7O14818 248 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 C7P10643 843 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 POLR2EP19388 210 aaKnown RBP11.28□□□□□ -0.6
PFDN5-210ENST00000550513 BRD2P25440 801 aaKnown RBP11.28□□□□□ -0.6
PFDN5-210ENST00000550513 SLC6A4P31645 630 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 CD70P32970 193 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 GRIA4P48058 902 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 CSNK1EP49674 416 aaKnown RBP11.28□□□□□ -0.6
PFDN5-210ENST00000550513 TBX4P57082 545 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 RPS14P62263 151 aaKnown RBP11.28□□□□□ -0.6
PFDN5-210ENST00000550513 RING1Q06587 406 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 SCAPQ12770 1279 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 CCDC40Q4G0X9 1142 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 FAM133BQ5BKY9 247 aaKnown RBP11.28□□□□□ -0.6
PFDN5-210ENST00000550513 MPP7Q5T2T1 576 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 PIK3R6Q5UE93 754 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 ZNF776Q68DI1 518 aaPredicted RBP11.28□□□□□ -0.6
PFDN5-210ENST00000550513 PMF1Q6P1K2 205 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 HJURPQ8NCD3 748 aaPredicted RBP11.28□□□□□ -0.6
PFDN5-210ENST00000550513 C1orf216Q8TAB5 229 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 SLC35F5Q8WV83 523 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 TFAP2BQ92481 460 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 ERCC4Q92889 916 aaPredicted RBP11.28□□□□□ -0.6
PFDN5-210ENST00000550513 BIRC7Q96CA5 298 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 PRICKLE1Q96MT3 831 aaPredicted RBP11.28□□□□□ -0.6
PFDN5-210ENST00000550513 GTPBP4Q9BZE4 634 aaKnown RBP11.28□□□□□ -0.6
PFDN5-210ENST00000550513 METTL14Q9HCE5 456 aaKnown RBP11.28□□□□□ -0.6
PFDN5-210ENST00000550513 TM9SF3Q9HD45 589 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 PRSS16Q9NQE7 514 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 HOOK1Q9UJC3 728 aaKnown RBP11.28□□□□□ -0.6
PFDN5-210ENST00000550513 PCDHGB2Q9Y5G2 931 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 SLCO1B1Q9Y6L6 691 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 DOCK4Q8N1I0 1966 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 CABIN1Q9Y6J0 2220 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 NBEAQ8NFP9 2946 aa11.28□□□□□ -0.6
PFDN5-210ENST00000550513 CELSR3Q9NYQ7 3312 aa11.27□□□□□ -0.6
PFDN5-210ENST00000550513 ANKRD11Q6UB99 2663 aaPredicted RBP11.27□□□□□ -0.6
PFDN5-210ENST00000550513 GOLGA6L7A0A1B0GV03 622 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 ACSL4O60488 711 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 FBXO21O94952 628 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 FSBPO95073 299 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 CCT8P50990 548 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 ST8SIA6P61647 398 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 CETN1Q12798 172 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 CDH18Q13634 790 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 KIF19Q2TAC6 998 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 LAYNQ6UX15 382 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 CCNI2Q6ZMN8 369 aaPredicted RBP11.27□□□□□ -0.61
PFDN5-210ENST00000550513 ADAT2Q7Z6V5 191 aaKnown RBP11.27□□□□□ -0.61
PFDN5-210ENST00000550513 SLCO6A1Q86UG4 719 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 SPATA20Q8TB22 786 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 RHBDD1Q8TEB9 315 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 SERPINB11Q96P15 392 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 CDC6Q99741 560 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 DDX50Q9BQ39 737 aaKnown RBP11.27□□□□□ -0.61
PFDN5-210ENST00000550513 ZSWIM1Q9BR11 485 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 MIS12Q9H081 205 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 CCDC86Q9H6F5 360 aaKnown RBP11.27□□□□□ -0.61
PFDN5-210ENST00000550513 SGK2Q9HBY8 427 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 OSGEPQ9NPF4 335 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 STIM2Q9P246 746 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 SNX11Q9Y5W9 270 aa11.27□□□□□ -0.61
PFDN5-210ENST00000550513 DSPP15924 2871 aaKnown RBP11.27□□□□□ -0.61
PFDN5-210ENST00000550513 BAHCC1Q9P281 2608 aa11.26□□□□□ -0.61
PFDN5-210ENST00000550513 LOC400499M0QZD8 3231 aa11.26□□□□□ -0.61
PFDN5-210ENST00000550513 FASNP49327 2511 aaKnown RBP11.26□□□□□ -0.61
PFDN5-210ENST00000550513 GOLGA8CPA6NN73 597 aa11.26□□□□□ -0.61
PFDN5-210ENST00000550513 TAF4O00268 1085 aa11.26□□□□□ -0.61
PFDN5-210ENST00000550513 PMM2O15305 246 aa11.26□□□□□ -0.61
PFDN5-210ENST00000550513 GABBR2O75899 941 aa11.26□□□□□ -0.61
PFDN5-210ENST00000550513 CALCAP01258 141 aa11.26□□□□□ -0.61
PFDN5-210ENST00000550513 ASLP04424 464 aa11.26□□□□□ -0.61
PFDN5-210ENST00000550513 CAPNS1P04632 268 aa11.26□□□□□ -0.61
PFDN5-210ENST00000550513 CD27P26842 260 aa11.26□□□□□ -0.61
PFDN5-210ENST00000550513 PPP1R2P41236 205 aa11.26□□□□□ -0.61
PFDN5-210ENST00000550513 GRK6P43250 576 aa11.26□□□□□ -0.61
PFDN5-210ENST00000550513 NNTQ13423 1086 aa11.26□□□□□ -0.61
PFDN5-210ENST00000550513 SUZ12Q15022 739 aaKnown RBP11.26□□□□□ -0.61
PFDN5-210ENST00000550513 CNGA2Q16280 664 aa11.26□□□□□ -0.61
PFDN5-210ENST00000550513 INAVAQ3KP66 663 aa11.26□□□□□ -0.61
PFDN5-210ENST00000550513 NADSYN1Q6IA69 706 aa11.26□□□□□ -0.61
PFDN5-210ENST00000550513 USP30Q70CQ3 517 aa11.26□□□□□ -0.61
PFDN5-210ENST00000550513 CCDC117Q8IWD4 279 aaPredicted RBP11.26□□□□□ -0.61
PFDN5-210ENST00000550513 DHX40Q8IX18 779 aaKnown RBP11.26□□□□□ -0.61
PFDN5-210ENST00000550513 CARNMT1Q8N4J0 409 aa11.26□□□□□ -0.61
PFDN5-210ENST00000550513 ENGASEQ8NFI3 743 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms