RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 DRGXA6NNA5 263 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 SPECC1L-ADORA2AF8WAN1 911 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 TRIM24O15164 1050 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 HOXC11O43248 304 aaPredicted RBP13.48□□□□□ -0.25
RAB5C-206ENST00000550406 PRPSAP2O60256 369 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 MOCS3O95396 460 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 CCDC175P0C221 793 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 RARAP10276 462 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 ADH5P11766 374 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 TYRP14679 529 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 COMTP21964 271 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 HOXD9P28356 352 aaPredicted RBP13.48□□□□□ -0.25
RAB5C-206ENST00000550406 AIF1P55008 147 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 PFKPQ01813 784 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 NRG1Q02297 640 aaPredicted RBP13.48□□□□□ -0.25
RAB5C-206ENST00000550406 GAD2Q05329 585 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 KIF5AQ12840 1032 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 ANO4Q32M45 955 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 ARL13BQ3SXY8 428 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 MPPE1Q53F39 396 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 KCNT1Q5JUK3 1230 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 CIR1Q86X95 450 aaPredicted RBP13.48□□□□□ -0.25
RAB5C-206ENST00000550406 ETFBKMTQ8IXQ9 262 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 PHTF2Q8N3S3 785 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 NAT16Q8N8M0 369 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 LRRC57Q8N9N7 239 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 WFDC5Q8TCV5 224 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 EDAQ92838 391 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 BHMTQ93088 406 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 KCTD15Q96SI1 283 aaPredicted RBP13.48□□□□□ -0.25
RAB5C-206ENST00000550406 NCAPGQ9BPX3 1015 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 BBS2Q9BXC9 721 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 IRX2Q9BZI1 471 aaPredicted RBP13.48□□□□□ -0.25
RAB5C-206ENST00000550406 ZWILCHQ9H900 591 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 FBRSL1Q9HCM7 1045 aaKnown RBP13.48□□□□□ -0.25
RAB5C-206ENST00000550406 OR12D3Q9UGF7 316 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 NEU3Q9UQ49 428 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.48□□□□□ -0.25
RAB5C-206ENST00000550406 PIAS3Q9Y6X2 628 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 TECTAO75443 2155 aa13.48□□□□□ -0.25
RAB5C-206ENST00000550406 VCANP13611 3396 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 MACROD2A1Z1Q3 448 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 E9PAM4 449 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 NEDD8-MDP1E9PL57 170 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 F5H5T6 163 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 DLL1O00548 723 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 DCXO43602 365 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 NRDCO43847 1150 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 TBL1XO60907 577 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 CNTN5O94779 1100 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 LRIG2O94898 1065 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 ADH1CP00326 375 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 CISD3P0C7P0 127 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 L1CAMP32004 1257 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 CTHP32929 405 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 GALK1P51570 392 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 ARSEP51690 589 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 NR1H3Q13133 447 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 MTA1Q13330 715 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 MLF2Q15773 248 aaPredicted RBP13.47□□□□□ -0.25
RAB5C-206ENST00000550406 SMTNL2Q2TAL5 461 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 BOLA3Q53S33 107 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 ALFQ53S48 1182 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 C11orf63Q6NUN7 778 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 ZNF687Q8N1G0 1237 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 FAM71BQ8TC56 605 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 DDI1Q8WTU0 396 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 TEKT4Q8WW24 435 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 LMLNQ96KR4 655 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 DDX50Q9BQ39 737 aaKnown RBP13.47□□□□□ -0.25
RAB5C-206ENST00000550406 C8orf33Q9H7E9 229 aaPredicted RBP13.47□□□□□ -0.25
RAB5C-206ENST00000550406 ZNF212Q9UDV6 495 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 LCMT1Q9UIC8 334 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 GUCA1BQ9UMX6 200 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 AP4E1Q9UPM8 1137 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 NCOR1O75376 2440 aa13.47□□□□□ -0.25
RAB5C-206ENST00000550406 MYO18AQ92614 2054 aaKnown RBP13.46□□□□□ -0.25
RAB5C-206ENST00000550406 ANTXRLA6NF34 631 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 PI4K2BG5E9Z4 385 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 CACNG3O60359 315 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 SRGAP2O75044 1071 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 GLULP15104 373 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 DESP17661 470 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 CD72P21854 359 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 IL4RP24394 825 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 STARD6P59095 220 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 EFHC2Q5JST6 749 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 MPP7Q5T2T1 576 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 TPRG1Q6ZUI0 275 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 RALGPS2Q86X27 583 aaPredicted RBP13.46□□□□□ -0.25
RAB5C-206ENST00000550406 PSTKQ8IV42 348 aaKnown RBP13.46□□□□□ -0.25
RAB5C-206ENST00000550406 SFTPA1Q8IWL2 248 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 TXLNBQ8N3L3 684 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 RNF10Q8N5U6 811 aaKnown RBP13.46□□□□□ -0.25
RAB5C-206ENST00000550406 HJURPQ8NCD3 748 aaPredicted RBP13.46□□□□□ -0.25
RAB5C-206ENST00000550406 HSPH1Q92598 858 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 EZH1Q92800 747 aaPredicted RBP13.46□□□□□ -0.25
RAB5C-206ENST00000550406 CD101Q93033 1021 aa13.46□□□□□ -0.25
RAB5C-206ENST00000550406 RPRD1AQ96P16 312 aaPredicted RBP13.46□□□□□ -0.25
RAB5C-206ENST00000550406 DHX35Q9H5Z1 703 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms