RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 DCAF6Q58WW2 860 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 LDLRAP1Q5SW96 308 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 FAM102AQ5T9C2 384 aaPredicted RBP12.43□□□□□ -0.42
VDR-208ENST00000550325 EGFLAMQ63HQ2 1017 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 THNSL1Q8IYQ7 743 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 MAPK15Q8TD08 544 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 TMEM143Q96AN5 459 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 KLHL32Q96NJ5 620 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 PGLYRP2Q96PD5 576 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 CEP41Q9BYV8 373 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 RAB6CQ9H0N0 254 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 NOL11Q9H8H0 719 aaKnown RBP12.43□□□□□ -0.42
VDR-208ENST00000550325 SEPT10Q9P0V9 454 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 SPATA7Q9P0W8 599 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 DOT1LQ8TEK3 1739 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 HTR3EA5X5Y0 456 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 SLC15A5A6NIM6 579 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 PMM2O15305 246 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 PLIN3O60664 434 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 ASTN2O75129 1339 aaPredicted RBP12.43□□□□□ -0.42
VDR-208ENST00000550325 RAP1GAPP47736 663 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 CD300CQ08708 224 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 TRAF2Q12933 501 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 NME3Q13232 169 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 CEACAM7Q14002 265 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 APOBEC3HQ6NTF7 200 aaKnown RBP12.43□□□□□ -0.42
VDR-208ENST00000550325 IRGQQ8WZA9 623 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 CDKL2Q92772 493 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 TARS2Q9BW92 718 aaKnown RBP12.43□□□□□ -0.42
VDR-208ENST00000550325 BRD8Q9H0E9 1235 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 XPNPEP3Q9NQH7 507 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 RIMS3Q9UJD0 308 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 AURKCQ9UQB9 309 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 RNF11Q9Y3C5 154 aa12.43□□□□□ -0.42
VDR-208ENST00000550325 SHANK3Q9BYB0 1731 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 CCDC78A2IDD5 438 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 C7orf72A4D263 438 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 KDM1AO60341 852 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 CST3P01034 146 aaPredicted RBP12.42□□□□□ -0.42
VDR-208ENST00000550325 PIM1P11309 404 aaPredicted RBP12.42□□□□□ -0.42
VDR-208ENST00000550325 UGT1A6P19224 532 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 CDH3P22223 829 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 UGT1A1P22309 533 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 UGT1A4P22310 534 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 ARRB2P32121 409 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 UGT1A3P35503 534 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 UGT1A5P35504 534 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 GTF2A2P52657 109 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 RALGDSQ12967 914 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 APOFQ13790 326 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 BTG3Q14201 252 aaPredicted RBP12.42□□□□□ -0.42
VDR-208ENST00000550325 PTK2BQ14289 1009 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 PCLAFQ15004 111 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 ATG14Q6ZNE5 492 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 ZBTB49Q6ZSB9 765 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 CENPSQ8N2Z9 138 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.42□□□□□ -0.42
VDR-208ENST00000550325 SNX31Q8N9S9 440 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 CYGBQ8WWM9 190 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 TFAP2BQ92481 460 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 ISOC1Q96CN7 298 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 POLR3FQ9H1D9 316 aaPredicted RBP12.42□□□□□ -0.42
VDR-208ENST00000550325 CISHQ9NSE2 258 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 CTDP1Q9Y5B0 961 aaPredicted RBP12.42□□□□□ -0.42
VDR-208ENST00000550325 HMX2A2RU54 273 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 PLOD2O00469 737 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 NFIBO00712 420 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 RGL2O15211 777 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 EXTL3O43909 919 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 HMGCRP04035 888 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 EEF1B2P24534 225 aaKnown RBP12.42□□□□□ -0.42
VDR-208ENST00000550325 TBXAS1P24557 533 aaPredicted RBP12.42□□□□□ -0.42
VDR-208ENST00000550325 MYL6P60660 151 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 NR1D2Q14995 579 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 C15orf59Q2T9L4 293 aaPredicted RBP12.42□□□□□ -0.42
VDR-208ENST00000550325 PDCD4Q53EL6 469 aaKnown RBP12.42□□□□□ -0.42
VDR-208ENST00000550325 ZFP1Q6P2D0 407 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 CAND1Q86VP6 1230 aaKnown RBP12.42□□□□□ -0.42
VDR-208ENST00000550325 SLC7A5P1Q8MH63 180 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 VPS50Q96JG6 964 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 SCYL1Q96KG9 808 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 AGAP3Q96P47 875 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 ADPGKQ9BRR6 497 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 TBCCD1Q9NVR7 557 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 CDY2AQ9Y6F7 541 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 CDY1Q9Y6F8 540 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 PHLPP1O60346 1717 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 ZNF541Q9H0D2 1346 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 C3orf70A6NLC5 250 aaPredicted RBP12.42□□□□□ -0.42
VDR-208ENST00000550325 PRPSAP2O60256 369 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 CLIC3O95833 236 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 C4BPAP04003 597 aaKnown RBP12.42□□□□□ -0.42
VDR-208ENST00000550325 ATP5BP06576 529 aaKnown RBP12.42□□□□□ -0.42
VDR-208ENST00000550325 GSTT2P0CG29 244 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 GSTT2BP0CG30 244 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 MPSTP25325 297 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 PHKA2P46019 1235 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 SERPINB9P50453 376 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 GNA12Q03113 381 aa12.42□□□□□ -0.42
VDR-208ENST00000550325 TGFBIQ15582 683 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms